RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 PI4KAP42356 2102 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 H0Y8X5 98 aa15.9■□□□□ 0.14
CCDC78-216ENST00000544996 FLRT2O43155 660 aa15.9■□□□□ 0.14
CCDC78-216ENST00000544996 SH3BP5O60239 455 aa15.9■□□□□ 0.14
CCDC78-216ENST00000544996 MAFKO60675 156 aa15.9■□□□□ 0.14
CCDC78-216ENST00000544996 LCA5LO95447 670 aa15.9■□□□□ 0.14
CCDC78-216ENST00000544996 HSPA9P38646 679 aaKnown RBP15.9■□□□□ 0.14
CCDC78-216ENST00000544996 ABL2P42684 1182 aa15.9■□□□□ 0.14
CCDC78-216ENST00000544996 ARRB1P49407 418 aaPredicted RBP15.9■□□□□ 0.14
CCDC78-216ENST00000544996 SCNN1BP51168 640 aa15.9■□□□□ 0.14
CCDC78-216ENST00000544996 NXPH1P58417 271 aa15.9■□□□□ 0.14
CCDC78-216ENST00000544996 AP1S1P61966 158 aa15.9■□□□□ 0.14
CCDC78-216ENST00000544996 SLC10A7Q0GE19 358 aa15.9■□□□□ 0.14
CCDC78-216ENST00000544996 N4BP2L1Q5TBK1 243 aaPredicted RBP15.9■□□□□ 0.14
CCDC78-216ENST00000544996 BRAT1Q6PJG6 821 aa15.9■□□□□ 0.14
CCDC78-216ENST00000544996 CAMK1DQ8IU85 385 aa15.9■□□□□ 0.14
CCDC78-216ENST00000544996 OXR1Q8N573 874 aa15.9■□□□□ 0.14
CCDC78-216ENST00000544996 TMEM145Q8NBT3 493 aa15.9■□□□□ 0.14
CCDC78-216ENST00000544996 FAM174AQ8TBP5 190 aa15.9■□□□□ 0.14
CCDC78-216ENST00000544996 KLHDC7BQ96G42 594 aa15.9■□□□□ 0.14
CCDC78-216ENST00000544996 ELF4Q99607 663 aaPredicted RBP15.9■□□□□ 0.14
CCDC78-216ENST00000544996 MYOCQ99972 504 aa15.9■□□□□ 0.14
CCDC78-216ENST00000544996 ERVMER34-1Q9H9K5 563 aa15.9■□□□□ 0.14
CCDC78-216ENST00000544996 PCDHA13Q9Y5I0 950 aa15.9■□□□□ 0.14
CCDC78-216ENST00000544996 LRRD1A4D1F6 860 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 IGLON5A6NGN9 336 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 AREL1O15033 823 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 YKT6O15498 198 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 SPOPO43791 374 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 PCDHGA12O60330 932 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 PIGNO95427 931 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 PAK4O96013 591 aaPredicted RBP15.89■□□□□ 0.13
CCDC78-216ENST00000544996 TIMP2P16035 220 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 KDELR1P24390 212 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 RGRP47804 291 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 POLR2LP62875 67 aaKnown RBP15.89■□□□□ 0.13
CCDC78-216ENST00000544996 BCL2L1Q07817 233 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 ELP6Q0PNE2 266 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 PAFAH1B3Q15102 231 aaKnown RBP15.89■□□□□ 0.13
CCDC78-216ENST00000544996 UGP2Q16851 508 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 INAVAQ3KP66 663 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 MARC1Q5VT66 337 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 LRRC38Q5VT99 294 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 RHOT1Q8IXI2 618 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 PCDH19Q8TAB3 1148 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 CXorf40AQ8TE69 158 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 RAPGEF5Q92565 580 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 C1QTNF2Q9BXJ5 285 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 MAK16Q9BXY0 300 aaKnown RBP15.89■□□□□ 0.13
CCDC78-216ENST00000544996 FZD3Q9NPG1 666 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 ITM2BQ9Y287 266 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 CA5BQ9Y2D0 317 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 HS3ST3A1Q9Y663 406 aa15.89■□□□□ 0.13
CCDC78-216ENST00000544996 EPN1Q9Y6I3 576 aaPredicted RBP15.89■□□□□ 0.13
CCDC78-216ENST00000544996 CACNA1AO00555 2505 aa15.88■□□□□ 0.13
CCDC78-216ENST00000544996 A0A1B0GTQ1 180 aa15.88■□□□□ 0.13
CCDC78-216ENST00000544996 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.88■□□□□ 0.13
CCDC78-216ENST00000544996 TSPAN11A1L157 253 aa15.88■□□□□ 0.13
CCDC78-216ENST00000544996 BUB1BO60566 1050 aaPredicted RBP15.88■□□□□ 0.13
CCDC78-216ENST00000544996 NDUFA10O95299 355 aa15.88■□□□□ 0.13
CCDC78-216ENST00000544996 THEGLP0DJG4 465 aa15.88■□□□□ 0.13
CCDC78-216ENST00000544996 MX2P20592 715 aa15.88■□□□□ 0.13
CCDC78-216ENST00000544996 GARSP41250 739 aaKnown RBP15.88■□□□□ 0.13
CCDC78-216ENST00000544996 MMP13P45452 471 aa15.88■□□□□ 0.13
CCDC78-216ENST00000544996 HADHBP55084 474 aaKnown RBP15.88■□□□□ 0.13
CCDC78-216ENST00000544996 SIM1P81133 766 aaPredicted RBP15.88■□□□□ 0.13
CCDC78-216ENST00000544996 GALNT2Q10471 571 aa15.88■□□□□ 0.13
CCDC78-216ENST00000544996 TRIP6Q15654 476 aaKnown RBP15.88■□□□□ 0.13
CCDC78-216ENST00000544996 LRRC73Q5JTD7 316 aa15.88■□□□□ 0.13
CCDC78-216ENST00000544996 PRAMEF14Q5SWL7 426 aa15.88■□□□□ 0.13
CCDC78-216ENST00000544996 NCBP2-AS2Q69YL0 99 aa15.88■□□□□ 0.13
CCDC78-216ENST00000544996 ERAP2Q6P179 960 aa15.88■□□□□ 0.13
CCDC78-216ENST00000544996 DBX2Q6ZNG2 339 aa15.88■□□□□ 0.13
CCDC78-216ENST00000544996 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.88■□□□□ 0.13
CCDC78-216ENST00000544996 RHBDD1Q8TEB9 315 aa15.88■□□□□ 0.13
CCDC78-216ENST00000544996 ASB12Q8WXK4 309 aa15.88■□□□□ 0.13
CCDC78-216ENST00000544996 FAF2Q96CS3 445 aa15.88■□□□□ 0.13
CCDC78-216ENST00000544996 ZNF830Q96NB3 372 aaPredicted RBP15.88■□□□□ 0.13
CCDC78-216ENST00000544996 C1QTNF7Q9BXJ2 289 aa15.88■□□□□ 0.13
CCDC78-216ENST00000544996 HAUS2Q9NVX0 235 aa15.88■□□□□ 0.13
CCDC78-216ENST00000544996 DDX56Q9NY93 547 aaKnown RBP15.88■□□□□ 0.13
CCDC78-216ENST00000544996 GGT7Q9UJ14 662 aa15.88■□□□□ 0.13
CCDC78-216ENST00000544996 ADAMTS9Q9P2N4 1935 aa15.88■□□□□ 0.13
CCDC78-216ENST00000544996 CACNA1EQ15878 2313 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 SOWAHDA6NJG2 315 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 A6NNZ2 444 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 ZNF487B1APH4 448 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 FPGTO14772 594 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 MUSKO15146 869 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 MFSD11O43934 449 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 TM7SF2O76062 418 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 PEX11BO96011 259 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 KRT1P04264 644 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 ITGAVP06756 1048 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 TNNT1P13805 278 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 COMTP21964 271 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 GRK6P43250 576 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 IL9RQ01113 521 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 IFI16Q16666 785 aaKnown RBP15.87■□□□□ 0.13
CCDC78-216ENST00000544996 RALGPS1Q5JS13 557 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms