RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 WWOXQ9NZC7 414 aa5.84□□□□□ -1.48
VPS50-220ENST00000544910 MPP6Q9NZW5 540 aa5.84□□□□□ -1.48
VPS50-220ENST00000544910 TMEM216Q9P0N5 145 aa5.84□□□□□ -1.48
VPS50-220ENST00000544910 NKX1-2Q9UD57 310 aaPredicted RBP5.84□□□□□ -1.48
VPS50-220ENST00000544910 TCAF1Q9Y4C2 921 aa5.84□□□□□ -1.48
VPS50-220ENST00000544910 PSMD12O00232 456 aaPredicted RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 PRRG1O14668 218 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 ITM2AO43736 263 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 EPHA3P29320 983 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 FMO4P31512 558 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 GRIA1P42261 906 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 BRCC3P46736 316 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 EIF2B2P49770 351 aaKnown RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 IRF9Q00978 393 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 KLF10Q13118 480 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 CDH18Q13634 790 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 GRB14Q14449 540 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 GRM3Q14832 879 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 PAFAH1B3Q15102 231 aaKnown RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 SAMD4BQ5PRF9 694 aaKnown RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 VWA5B1Q5TIE3 1220 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 CXCL17Q6UXB2 119 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 B3GNT6Q6ZMB0 384 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 IFNEQ86WN2 208 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 ZNF781Q8N8C0 355 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 RCN3Q96D15 328 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 CAAP1Q9H8G2 361 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 RMI1Q9H9A7 625 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 USP29Q9HBJ7 922 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 CRYL1Q9Y2S2 319 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 NDUFAF1Q9Y375 327 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 SNX10Q9Y5X0 201 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 DOCK1Q14185 1865 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 MSI1O43347 362 aaKnown RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 HCRTO43612 131 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 FAM163BP0C2L3 166 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 MBL2P11226 248 aaPredicted RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 KCNE1P15382 129 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 IFNA8P32881 189 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 SOX11P35716 441 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 NUMBP49757 651 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 SCNN1BP51168 640 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 PDK3Q15120 406 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 NDUFA5Q16718 116 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 TBCELQ5QJ74 424 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 TMTC4Q5T4D3 741 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 CACHD1Q5VU97 1274 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 TAPT1Q6NXT6 567 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 AFTPHQ6ULP2 937 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 PIWIL4Q7Z3Z4 852 aaKnown RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 CAND1Q86VP6 1230 aaKnown RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 CLEC4FQ8N1N0 589 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 PIWIL1Q96J94 861 aaKnown RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 FCRL2Q96LA5 508 aaPredicted RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 AGAP2Q99490 1192 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 ACBD6Q9BR61 282 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 TMEM79Q9BSE2 394 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 RAD21L1Q9H4I0 556 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 TAS2R13Q9NYV9 303 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 CCDC167Q9P0B6 97 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 CRLS1Q9UJA2 301 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 SH3BP1Q9Y3L3 701 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 MTF2Q9Y483 593 aaPredicted RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 NR2E3Q9Y5X4 410 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 KANSL1LA0AUZ9 987 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 CBX4O00257 560 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 PIRO00625 290 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 MATN3O15232 486 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 DLGAP3O95886 979 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 ALDH2P05091 517 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 C2P06681 752 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 HIST1H2AGP0C0S8 130 aaPredicted RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 VAV1P15498 845 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 HIST1H2ADP20671 130 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 LRPAP1P30533 357 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 PSEN1P49768 467 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 ST13P50502 369 aaKnown RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 PSME3P61289 254 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 RHOAP61586 193 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 NAA20P61599 178 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 BTKQ06187 659 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 ELAVL2Q12926 359 aaKnown RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 BLMHQ13867 455 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 SYTL3Q4VX76 610 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 ATP6AP1LQ52LC2 224 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 SYPL2Q5VXT5 272 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 TRIM69Q86WT6 500 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 OR56A4Q8NGH8 313 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 ZSCAN18Q8TBC5 510 aaPredicted RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 DQX1Q8TE96 717 aaKnown RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 HIST1H2AHQ96KK5 128 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 ZFP42Q96MM3 310 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 HIST1H2AJQ99878 128 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 H2AFJQ9BTM1 129 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 SPAG4Q9NPE6 437 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 MKS1Q9NXB0 559 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 ATXN10Q9UBB4 475 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 DKK3Q9UBP4 350 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 UBA2Q9UBT2 640 aaPredicted RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 SMIM31A0A1B0GVY4 71 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms