RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 ULBP1Q9BZM6 244 aa15.56■□□□□ 0.08
CHD4-210ENST00000544040 PDGFDQ9GZP0 370 aaPredicted RBP15.56■□□□□ 0.08
CHD4-210ENST00000544040 MAGI3Q5TCQ9 1506 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 G3V2T6 193 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 TFEBP19484 476 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 PPP2R2BQ00005 443 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 C10orf107Q8IVU9 208 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 DEPDC4Q8N2C3 294 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 OR4A15Q8NGL6 344 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 TRNT1Q96Q11 434 aaKnown RBP15.55■□□□□ 0.08
CHD4-210ENST00000544040 GNPTGQ9UJJ9 305 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 SHROOM2Q13796 1616 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 ANKRD63C9JTQ0 380 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 SGTAO43765 313 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 OR10H2O60403 315 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 NRP2O60462 931 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 RFX5P48382 616 aaPredicted RBP15.55■□□□□ 0.08
CHD4-210ENST00000544040 GALK1P51570 392 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 GTF2A2P52657 109 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 SREBF2Q12772 1141 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 IL18Q14116 193 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 GRB14Q14449 540 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 XKR6Q5GH73 641 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 FUCA2Q9BTY2 467 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 CLK4Q9HAZ1 481 aaKnown RBP15.55■□□□□ 0.08
CHD4-210ENST00000544040 PCDHB12Q9Y5F1 795 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.55■□□□□ 0.088e-12■■■□□ 17
CHD4-210ENST00000544040 CHADO15335 359 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 BST1Q10588 318 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 NEK5Q6P3R8 708 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 FBXL19Q6PCT2 694 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 TXNRD3Q86VQ6 643 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 KATNAL2Q8IYT4 538 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 TCAIMQ8N3R3 496 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 NETO2Q8NC67 525 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 FAM81AQ8TBF8 368 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 IL22Q9GZX6 179 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 CPA4Q9UI42 421 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 RBMXL2O75526 392 aaKnown RBP15.55■□□□□ 0.08
CHD4-210ENST00000544040 SLC25A12O75746 678 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 NRG1Q02297 640 aaPredicted RBP15.55■□□□□ 0.08
CHD4-210ENST00000544040 ABRQ12979 859 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 RMI1Q9H9A7 625 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 STOML2Q9UJZ1 356 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 A0A088AWK7 358 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 CASKO14936 926 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 ASTN2O75129 1339 aaPredicted RBP15.55■□□□□ 0.08
CHD4-210ENST00000544040 TCF4P15884 667 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 ZNF10P21506 573 aaPredicted RBP15.55■□□□□ 0.08
CHD4-210ENST00000544040 RAP1GAP2Q684P5 730 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 ZNF554Q86TJ5 538 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 DSELQ8IZU8 1212 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 AP3S1Q92572 193 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 DUSP9Q99956 384 aaKnown RBP15.55■□□□□ 0.08
CHD4-210ENST00000544040 IGFLR1Q9H665 355 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 TRNAU1APQ9NX07 287 aaKnown RBP15.55■□□□□ 0.08
CHD4-210ENST00000544040 GPSM3Q9Y4H4 160 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 AK5Q9Y6K8 562 aa15.55■□□□□ 0.08
CHD4-210ENST00000544040 CRB1P82279 1406 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 PGK1P00558 417 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 CLUP10909 449 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 POLR2EP19388 210 aaKnown RBP15.54■□□□□ 0.08
CHD4-210ENST00000544040 SEPHS1P49903 392 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 BACE1P56817 501 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 PTPN20Q4JDL3 420 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 ATP13A4Q4VNC1 1196 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 CERS2Q96G23 380 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 A0A087X0B3 334 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 DHRS12A0PJE2 317 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 SERPINA1P01009 418 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 PIRTP0C851 137 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 GALNT3Q14435 633 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 LZTR1Q8N653 840 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 ATL1Q8WXF7 558 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 A8MUI8 341 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 H3BRB1 525 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 BMP7P18075 431 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 TLX1P31314 330 aaPredicted RBP15.54■□□□□ 0.08
CHD4-210ENST00000544040 ARHGDIBP52566 201 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 PRR23CQ6ZRP0 262 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 SLC34A3Q8N130 599 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 MEIOBQ8N635 442 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 OR52K2Q8NGK3 314 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 SYTL5Q8TDW5 730 aaPredicted RBP15.54■□□□□ 0.08
CHD4-210ENST00000544040 QRFPRQ96P65 431 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 TCF12Q99081 682 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 TUT1Q9H6E5 874 aaKnown RBP15.54■□□□□ 0.08
CHD4-210ENST00000544040 STARD7Q9NQZ5 370 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 C2orf71A6NGG8 1288 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 TIPRLO75663 272 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 DPEP1P16444 411 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 ITGA2P17301 1181 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 FAM183BPQ6ZVS7 135 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 PANX1Q96RD7 426 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 ACSS2Q9NR19 701 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.54■□□□□ 0.08
CHD4-210ENST00000544040 TBC1D24Q9ULP9 559 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 AP3M1Q9Y2T2 418 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 POLR3HQ9Y535 204 aaPredicted RBP15.54■□□□□ 0.08
CHD4-210ENST00000544040 INO80Q9ULG1 1556 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms