RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 ITKQ08881 620 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 NIPAL4Q0D2K0 466 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 WASHC5Q12768 1159 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 XRCC4Q13426 336 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 LRRC73Q5JTD7 316 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 FBXL19Q6PCT2 694 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 ADAT2Q7Z6V5 191 aaKnown RBP15.25■□□□□ 0.03
CD9-210ENST00000543916 SLC13A5Q86YT5 568 aaPredicted RBP15.25■□□□□ 0.03
CD9-210ENST00000543916 C17orf53Q8N3J3 647 aaPredicted RBP15.25■□□□□ 0.03
CD9-210ENST00000543916 CADM4Q8NFZ8 388 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 OR2T34Q8NGX1 318 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 ARRDC2Q8TBH0 407 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 ZNF641Q96N77 438 aaPredicted RBP15.25■□□□□ 0.03
CD9-210ENST00000543916 DKK3Q9UBP4 350 aa15.25■□□□□ 0.03
CD9-210ENST00000543916 ATXN2Q99700 1313 aaKnown RBP15.24■□□□□ 0.03
CD9-210ENST00000543916 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.24■□□□□ 0.03
CD9-210ENST00000543916 LRRC72A6NJI9 287 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 METTL12A8MUP2 240 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 TRAFD1O14545 582 aaPredicted RBP15.24■□□□□ 0.03
CD9-210ENST00000543916 FSBPO95073 299 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 ATP1A1P05023 1023 aaKnown RBP15.24■□□□□ 0.03
CD9-210ENST00000543916 IGHV4-34P06331 123 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 RBP3P10745 1247 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 TIMP2P16035 220 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 ITPKAP23677 461 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 RBL1P28749 1068 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 PPP2CBP62714 309 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 PPP2CAP67775 309 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 TRAF2Q12933 501 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 RALGPS1Q5JS13 557 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 LYSMD4Q5XG99 296 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 KIAA0895LQ68EN5 471 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 CYP2U1Q7Z449 544 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 FOXJ1Q92949 421 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 ECHDC3Q96DC8 303 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 LOXL4Q96JB6 756 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 AGAP3Q96P47 875 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 PCED1AQ9H1Q7 454 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 KDM4CQ9H3R0 1056 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 GGT7Q9UJ14 662 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 ITM2BQ9Y287 266 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.24■□□□□ 0.03
CD9-210ENST00000543916 PCDHGC4Q9Y5F7 938 aa15.24■□□□□ 0.03
CD9-210ENST00000543916 LRRK1Q38SD2 2015 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 TBC1D3DA0A087WVF3 549 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 TBC1D3IA0A087WXS9 549 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 TBC1D3EA0A087X179 549 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 TBC1D3KA0A087X1G2 549 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 BCLAF3A2AJT9 711 aaKnown RBP15.23■□□□□ 0.03
CD9-210ENST00000543916 TBC1D3FA6NER0 549 aaPredicted RBP15.23■□□□□ 0.03
CD9-210ENST00000543916 MEI4A8MW99 385 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 TBC1D3LB9A6J9 549 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 MTSS1O43312 755 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 HTRA2O43464 458 aaPredicted RBP15.23■□□□□ 0.03
CD9-210ENST00000543916 SOCS5O75159 536 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 MMP2P08253 660 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 TBC1D3HP0C7X1 549 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 ITIH2P19823 946 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 MAOBP27338 520 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 PLA2G5P39877 138 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 CREB5Q02930 508 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 TEX44Q53QW1 395 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 TBC1D3GQ6DHY5 549 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 TBC1D3CQ6IPX1 549 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 CDKL3Q8IVW4 592 aaPredicted RBP15.23■□□□□ 0.03
CD9-210ENST00000543916 TBC1D3Q8IZP1 549 aaPredicted RBP15.23■□□□□ 0.03
CD9-210ENST00000543916 TTC13Q8NBP0 860 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 HCAR2Q8TDS4 363 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 HTR3CQ8WXA8 447 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 ATG4AQ8WYN0 398 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 BIRC7Q96CA5 298 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 ARRDC1-AS1Q9H2J1 176 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 PREBQ9HCU5 417 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 KCND1Q9NSA2 647 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 TMEM74BQ9NUR3 256 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 HAUS2Q9NVX0 235 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 NCDNQ9UBB6 729 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 FADS3Q9Y5Q0 445 aa15.23■□□□□ 0.03
CD9-210ENST00000543916 WDR87Q6ZQQ6 2873 aa15.22■□□□□ 0.03
CD9-210ENST00000543916 AREL1O15033 823 aa15.22■□□□□ 0.03
CD9-210ENST00000543916 AP1G1O43747 822 aa15.22■□□□□ 0.03
CD9-210ENST00000543916 CEP104O60308 925 aa15.22■□□□□ 0.03
CD9-210ENST00000543916 RNGTTO60942 597 aaKnown RBP15.22■□□□□ 0.03
CD9-210ENST00000543916 PRKCGP05129 697 aa15.22■□□□□ 0.03
CD9-210ENST00000543916 RETP07949 1114 aa15.22■□□□□ 0.03
CD9-210ENST00000543916 MSNP26038 577 aaKnown RBP15.22■□□□□ 0.03
CD9-210ENST00000543916 CD68P34810 354 aaPredicted RBP15.22■□□□□ 0.03
CD9-210ENST00000543916 CD86P42081 329 aa15.22■□□□□ 0.03
CD9-210ENST00000543916 SKOR1P84550 965 aa15.22■□□□□ 0.03
CD9-210ENST00000543916 CCDC15Q0P6D6 951 aa15.22■□□□□ 0.03
CD9-210ENST00000543916 SIX1Q15475 284 aaPredicted RBP15.22■□□□□ 0.03
CD9-210ENST00000543916 CCDC6Q16204 474 aa15.22■□□□□ 0.03
CD9-210ENST00000543916 CFAP58Q5T655 872 aa15.22■□□□□ 0.03
CD9-210ENST00000543916 DARS2Q6PI48 645 aaKnown RBP15.22■□□□□ 0.03
CD9-210ENST00000543916 BRAT1Q6PJG6 821 aa15.22■□□□□ 0.03
CD9-210ENST00000543916 TTC7BQ86TV6 843 aa15.22■□□□□ 0.03
CD9-210ENST00000543916 ZNF567Q8N184 647 aa15.22■□□□□ 0.03
CD9-210ENST00000543916 SLC35B2Q8TB61 432 aa15.22■□□□□ 0.03
CD9-210ENST00000543916 PDCD6IPQ8WUM4 868 aaKnown RBP15.22■□□□□ 0.03
CD9-210ENST00000543916 DNASE2BQ8WZ79 361 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms