RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 H2AFJQ9BTM1 129 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 CADM1Q9BY67 442 aaKnown RBP4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 XPO4Q9C0E2 1151 aaKnown RBP4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 ST6GALNAC4Q9H4F1 302 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 COPS7BQ9H9Q2 264 aaPredicted RBP4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 ENTPD7Q9NQZ7 604 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 SLC6A13Q9NSD5 602 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 TMEM74BQ9NUR3 256 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 TMEM248Q9NWD8 314 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 WSB2Q9NYS7 404 aaPredicted RBP4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 ANAPC2Q9UJX6 822 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 AMFRQ9UKV5 643 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 BTBD3Q9Y2F9 522 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 MAP3K2Q9Y2U5 619 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 POMT1Q9Y6A1 747 aa4.09□□□□□ -1.75
SFSWAP-211ENST00000542813 LOC100509620A0A075B734 347 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 TRAV34A0A0B4J273 112 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 A0A0U1RQK1 487 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 ARHGAP10A1A4S6 786 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 ZNF320A2RRD8 509 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 OR6C68A6NDL8 312 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 FAM90A8PA6NJQ4 464 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 TTC34A8MYJ7 566 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 USP17L23D6RBM5 183 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 H0YAE9 185 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 IFNL4K9M1U5 179 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 RTCAO00442 366 aaKnown RBP4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 WDR46O15213 610 aaKnown RBP4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 PAPSS1O43252 624 aaPredicted RBP4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 SUV39H1O43463 412 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 SYNCRIPO60506 623 aaKnown RBP4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 DIAPH2O60879 1101 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 CNTN5O94779 1100 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 TPPPO94811 219 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 SCAF4O95104 1147 aaKnown RBP4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 CBX6O95503 412 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 FTCDO95954 541 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 SRPRAP08240 638 aaKnown RBP4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 FAM90A13PP0C7W8 464 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 FAM90A24PP0C7X0 464 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 FDPSP14324 419 aaKnown RBP4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 NDUFS1P28331 727 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 HOXA13P31271 388 aaPredicted RBP4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 AGLP35573 1532 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 BMPR1AP36894 532 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 GABRB2P47870 512 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 ALDH3A2P51648 485 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 ADPRHP54922 357 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 WDR5P61964 334 aaKnown RBP4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 TAP1Q03518 808 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 GAB1Q13480 694 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 ALCAMQ13740 583 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 NFE2L1Q14494 772 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 VEPH1Q14D04 833 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 RNPS1Q15287 305 aaKnown RBP4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 ERCC6LQ2NKX8 1250 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 ALG11Q2TAA5 492 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 KRTCAP3Q53RY4 240 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 DNAJC21Q5F1R6 531 aaKnown RBP4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 TXNDC8Q6A555 127 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 AADACL2Q6P093 401 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 TATDN1Q6P1N9 297 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 IYDQ6PHW0 289 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 Q6ZRM9 215 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 CLEC17AQ6ZS10 378 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 PIWIL3Q7Z3Z3 882 aaKnown RBP4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 ZNF804AQ7Z570 1209 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 NEK8Q86SG6 692 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 SGMS1Q86VZ5 419 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 ERC1Q8IUD2 1116 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 FUKQ8N0W3 1084 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 AMER2Q8N7J2 671 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 C12orf76Q8N812 135 aaPredicted RBP4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 SCAIQ8N9R8 606 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 SLC16A11Q8NCK7 471 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 CHST13Q8NET6 341 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 SETD6Q8TBK2 473 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 GRK7Q8WTQ7 553 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 ZNF622Q969S3 477 aaKnown RBP eCLIP4.08□□□□□ -1.761e-6■□□□□ 8.9
SFSWAP-211ENST00000542813 EDC3Q96F86 508 aaKnown RBP4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 ELMOD3Q96FG2 381 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 HS6ST2Q96MM7 605 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 NAA11Q9BSU3 229 aaPredicted RBP4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 KIFC3Q9BVG8 833 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 CCDC106Q9BWC9 280 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 SCAPERQ9BY12 1400 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 HRH4Q9H3N8 390 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 OSGEPL1Q9H4B0 414 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 PLK3Q9H4B4 646 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 KIF9Q9HAQ2 790 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 ASAH2Q9NR71 780 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 ARL15Q9NXU5 204 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 COQ3Q9NZJ6 369 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 SH3BP4Q9P0V3 963 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 ABI3Q9P2A4 366 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 DNAJB9Q9UBS3 223 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 CTNNAL1Q9UBT7 734 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 ODF2LQ9ULJ1 636 aa4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 DHDHQ9UQ10 334 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms