RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 CDH5P33151 784 aaPredicted RBP18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 SCNN1AP37088 669 aa18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 NFKB2Q00653 900 aa18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 EXOC3L4Q17RC7 722 aa18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 RAB6CQ53S08 254 aa18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 C2CD6Q53TS8 623 aa18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 NYAP1Q6ZVC0 841 aa18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 RAB11FIP2Q7L804 512 aa18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 FAM131BQ86XD5 332 aa18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 RYBPQ8N488 228 aaPredicted RBP18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 FBXO39Q8N4B4 442 aa18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 ARL10Q8N8L6 244 aa18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 OR2AP1Q8NGE2 309 aa18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 PCDH19Q8TAB3 1148 aa18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 EXTL1Q92935 676 aa18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 ARHGEF2Q92974 986 aaKnown RBP18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 CCDC74AQ96AQ1 378 aa18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 CFAP57Q96MR6 1250 aa18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 KLHL32Q96NJ5 620 aa18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 FOXP3Q9BZS1 431 aa18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 FAM117AQ9C073 453 aa18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 RAB6CQ9H0N0 254 aa18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 STARD5Q9NSY2 213 aa18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 TLN1Q9Y490 2541 aaKnown RBP18.06■□□□□ 0.48
CLSTN3-214ENST00000542663 MMP20O60882 483 aa18.05■□□□□ 0.48
CLSTN3-214ENST00000542663 GSRP00390 522 aa18.05■□□□□ 0.48
CLSTN3-214ENST00000542663 CCL7P80098 99 aa18.05■□□□□ 0.48
CLSTN3-214ENST00000542663 PPARDQ03181 441 aa18.05■□□□□ 0.48
CLSTN3-214ENST00000542663 EIF3IQ13347 325 aaKnown RBP18.05■□□□□ 0.48
CLSTN3-214ENST00000542663 MANEALQ5VSG8 457 aa18.05■□□□□ 0.48
CLSTN3-214ENST00000542663 SMYD5Q6GMV2 418 aa18.05■□□□□ 0.48
CLSTN3-214ENST00000542663 NLRP14Q86W24 1093 aa18.05■□□□□ 0.48
CLSTN3-214ENST00000542663 ARHGEF26Q96DR7 871 aa18.05■□□□□ 0.48
CLSTN3-214ENST00000542663 SGF29Q96ES7 293 aa18.05■□□□□ 0.48
CLSTN3-214ENST00000542663 GFM1Q96RP9 751 aaKnown RBP18.05■□□□□ 0.48
CLSTN3-214ENST00000542663 EPAS1Q99814 870 aa18.05■□□□□ 0.48
CLSTN3-214ENST00000542663 SIRPGQ9P1W8 387 aa18.05■□□□□ 0.48
CLSTN3-214ENST00000542663 GULP1Q9UBP9 304 aa18.05■□□□□ 0.48
CLSTN3-214ENST00000542663 TMEM59LQ9UK28 342 aa18.05■□□□□ 0.48
CLSTN3-214ENST00000542663 DNAJC12Q9UKB3 198 aa18.05■□□□□ 0.48
CLSTN3-214ENST00000542663 HEMK1Q9Y5R4 338 aaPredicted RBP18.05■□□□□ 0.48
CLSTN3-214ENST00000542663 DOPEY2Q9Y3R5 2298 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 GTPBP10A4D1E9 387 aaKnown RBP18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 TM7SF2O76062 418 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 GJB6O95452 261 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 HK3P52790 923 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 IRF4Q15306 451 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 TCEA2Q15560 299 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 KLHL40Q2TBA0 621 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 MYLK3Q32MK0 819 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 ATXN7L2Q5T6C5 722 aaPredicted RBP18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 DPY19L2P1Q6NXN4 242 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 LEKR1Q6ZMV7 388 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 USP53Q70EK8 1073 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 TTC7BQ86TV6 843 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 JAMLQ86YT9 394 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 IRF2BP1Q8IU81 584 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 FAM71AQ8IYT1 594 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 SDR16C5Q8N3Y7 309 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 FSTL5Q8N475 847 aaPredicted RBP18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 C18orf8Q96DM3 657 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 OSBPL1AQ9BXW6 950 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 WDR70Q9NW82 654 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 TMEM51Q9NW97 253 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 NEU3Q9UQ49 428 aa18.04■□□□□ 0.48
CLSTN3-214ENST00000542663 ZFC3H1O60293 1989 aaKnown RBP18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 TOR1BO14657 336 aa18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 FGFR1OPO95684 399 aaKnown RBP18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 POP4O95707 220 aaKnown RBP18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 ITGB2P05107 769 aa18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 RPLP0P05388 317 aaKnown RBP18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 CCKBRP32239 447 aa18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 INHBCP55103 352 aa18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 SNRPD1P62314 119 aaKnown RBP18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 SRSF1Q07955 248 aaKnown RBP eCLIP18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 ELOCQ15369 112 aa18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 ALG11Q2TAA5 492 aa18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 LVRNQ6Q4G3 990 aa18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 GDPD4Q6W3E5 623 aa18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 CREBRFQ8IUR6 639 aa18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 HID1Q8IV36 788 aa18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 TMEM35BQ8NCS4 154 aa18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 TSACCQ96A04 125 aaPredicted RBP18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 MAGEB5Q9BZ81 275 aa18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 CPEB1Q9BZB8 566 aaKnown RBP18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 EDEM3Q9BZQ6 932 aa18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 DNAI1Q9UI46 699 aa18.03■□□□□ 0.48
CLSTN3-214ENST00000542663 FAM72CH0Y354 149 aa18.02■□□□□ 0.48
CLSTN3-214ENST00000542663 GOLGA8SH3BPF8 625 aa18.02■□□□□ 0.48
CLSTN3-214ENST00000542663 NVLO15381 856 aaKnown RBP18.02■□□□□ 0.48
CLSTN3-214ENST00000542663 LIPCP11150 499 aa18.02■□□□□ 0.48
CLSTN3-214ENST00000542663 ETFBP38117 255 aa18.02■□□□□ 0.48
CLSTN3-214ENST00000542663 BLKP51451 505 aa18.02■□□□□ 0.48
CLSTN3-214ENST00000542663 GEMIN4P57678 1058 aaKnown RBP18.02■□□□□ 0.48
CLSTN3-214ENST00000542663 NRG1Q02297 640 aaPredicted RBP18.02■□□□□ 0.48
CLSTN3-214ENST00000542663 POLD3Q15054 466 aaPredicted RBP18.02■□□□□ 0.48
CLSTN3-214ENST00000542663 FAM72AQ5TYM5 149 aa18.02■□□□□ 0.48
CLSTN3-214ENST00000542663 KCTD16Q68DU8 428 aa18.02■□□□□ 0.48
CLSTN3-214ENST00000542663 FAM72DQ6L9T8 149 aa18.02■□□□□ 0.48
CLSTN3-214ENST00000542663 XKR5Q6UX68 686 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms