RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 TTC39AQ5SRH9 613 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 SFRP5Q5T4F7 317 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 ZNF618Q5T7W0 954 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 C1orf146Q5VVC0 180 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 DUPD1Q68J44 220 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 PDPK2PQ6A1A2 396 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 ZNF425Q6IV72 752 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 ZNF544Q6NX49 715 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 ARSKQ6UWY0 536 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 PLEKHG7Q6ZR37 379 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 CCDC149Q6ZUS6 474 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 C22orf34Q6ZV56 151 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 RTL10Q7L3V2 364 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 KRT74Q7RTS7 529 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 CLNKQ7Z7G1 428 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 TSPYL5Q86VY4 417 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 PLCZ1Q86YW0 608 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 RHPN2Q8IUC4 686 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 LIX1LQ8IVB5 337 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 TPH2Q8IWU9 490 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 MICU2Q8IYU8 434 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 DCP1BQ8IZD4 617 aaKnown RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 IFNL2Q8IZJ0 200 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 CCDC33Q8N5R6 958 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 PLD5Q8N7P1 536 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 SNX31Q8N9S9 440 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 OR8K5Q8NH50 307 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 FBXO30Q8TB52 745 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 LRRC20Q8TCA0 184 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 IFI44Q8TCB0 444 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 SYTL5Q8TDW5 730 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 SLC13A3Q8WWT9 602 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 PIK3R3Q92569 461 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 ESR2Q92731 530 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 SYN2Q92777 582 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 NELL1Q92832 810 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 TSR2Q969E8 191 aaKnown RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 PPP1R14AQ96A00 147 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 RAB7BQ96AH8 199 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 ISOC1Q96CN7 298 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 TUBGCP3Q96CW5 907 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 NXPE2Q96DL1 559 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 CHFRQ96EP1 664 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 PTCD3Q96EY7 689 aaKnown RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 MSANTD3Q96H12 275 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 TMEM68Q96MH6 324 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 ASB2Q96Q27 587 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 RIT2Q99578 217 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 CDC6Q99741 560 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 PELOQ9BRX2 385 aaKnown RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 AARSD1Q9BTE6 412 aaKnown RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 TARS2Q9BW92 718 aaKnown RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 TLR10Q9BXR5 811 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 SLC19A3Q9BZV2 496 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 USP44Q9H0E7 712 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 CSRNP2Q9H175 543 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 ZNF556Q9HAH1 456 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 NGRNQ9NPE2 291 aaKnown RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 MRPL40Q9NQ50 206 aaKnown RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 CYP26B1Q9NR63 512 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 KLHL1Q9NR64 748 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 PNPLA3Q9NST1 481 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 GGA3Q9NZ52 723 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 CCDC59Q9P031 241 aaKnown RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 PI4KBQ9UBF8 816 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 DPP7Q9UHL4 492 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 NARFQ9UHQ1 456 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 LGALS13Q9UHV8 139 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 RWDD2AQ9UIY3 292 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 ZNF221Q9UK13 617 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 POU2F3Q9UKI9 436 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 MAN1B1Q9UKM7 699 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 FBXL21Q9UKT6 434 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 AKT3Q9Y243 479 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 GINS2Q9Y248 185 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 MYRFQ9Y2G1 1151 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 CHTOPQ9Y3Y2 248 aaKnown RBP4.39□□□□□ -1.71
SNHG1-219ENST00000542112 DMRT1Q9Y5R6 373 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 TRPV2Q9Y5S1 764 aa4.39□□□□□ -1.71
SNHG1-219ENST00000542112 CAMTA1Q9Y6Y1 1673 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 USP6P35125 1406 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 NFAT5O94916 1531 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 A0A1B0GTQ1 180 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 TMEM82A0PJX8 343 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 TMEM120BA0PK00 339 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 ZSCAN5CA6NGD5 496 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-219ENST00000542112 TRIM75PA6NK02 468 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 ACOD1A6NK06 481 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 LGALS16A8MUM7 142 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 TARM1B6A8C7 271 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 H3BMM5 538 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 PSMD12O00232 456 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-219ENST00000542112 ELL2O00472 640 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-219ENST00000542112 PRPF4O43172 522 aaKnown RBP eCLIP4.38□□□□□ -1.71
SNHG1-219ENST00000542112 TEX33O43247 280 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 ARHGEF9O43307 516 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 GMDSO60547 372 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 CCNT2O60583 730 aaKnown RBP4.38□□□□□ -1.71
SNHG1-219ENST00000542112 SPAG6O75602 509 aa4.38□□□□□ -1.71
SNHG1-219ENST00000542112 RFPL2O75678 378 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms