RNA–Protein interactions for RNA: ENST00000541099.5

TRIT1-215, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRIT1, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-215ENST00000541099 SF3A2Q15428 464 aaKnown RBP11.82□□□□□ -0.52
TRIT1-215ENST00000541099 SPDYCQ5MJ68 293 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 MARC1Q5VT66 337 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 LYSMD4Q5XG99 296 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 SEL1L3Q68CR1 1132 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 KIAA0895LQ68EN5 471 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 CCNYQ8ND76 341 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 OR2T34Q8NGX1 318 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 ACTL9Q8TC94 416 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 RUBCNQ92622 972 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 PIGKQ92643 395 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 ECHDC3Q96DC8 303 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 LRIG1Q96JA1 1093 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 NUDCD1Q96RS6 583 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 SUV39H2Q9H5I1 410 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 DKK3Q9UBP4 350 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 EIF2B4Q9UI10 523 aaKnown RBP11.82□□□□□ -0.52
TRIT1-215ENST00000541099 RAB23Q9ULC3 237 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 NCKAP1Q9Y2A7 1128 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 EFR3BQ9Y2G0 817 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 PCDHGC4Q9Y5F7 938 aa11.82□□□□□ -0.52
TRIT1-215ENST00000541099 PTPRZ1P23471 2315 aaPredicted RBP11.82□□□□□ -0.52
TRIT1-215ENST00000541099 GVINP1Q7Z2Y8 2422 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 APOC4-APOC2K7ER74 178 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 FANCGO15287 622 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 SLC7A4O43246 635 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 HTRA2O43464 458 aaPredicted RBP11.81□□□□□ -0.52
TRIT1-215ENST00000541099 FSBPO95073 299 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 PRLP01236 227 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 APOC2P02655 101 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 NR2C2P49116 596 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 NEK3P51956 506 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 CCDC173Q0VFZ6 552 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 AP1B1Q10567 949 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 ZNF235Q14590 738 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 PDK1Q15118 436 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 SIX1Q15475 284 aaPredicted RBP11.81□□□□□ -0.52
TRIT1-215ENST00000541099 ODF2Q5BJF6 829 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 LAYNQ6UX15 382 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 ZC3H18Q86VM9 953 aaKnown RBP11.81□□□□□ -0.52
TRIT1-215ENST00000541099 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.81□□□□□ -0.52
TRIT1-215ENST00000541099 KLK6Q92876 244 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 TADA1Q96BN2 335 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 QKIQ96PU8 341 aaKnown RBP eCLIP11.81□□□□□ -0.524e-6■□□□□ 10.5
TRIT1-215ENST00000541099 SEMA3CQ99985 751 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 GORASP1Q9BQQ3 440 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 OSBPL1AQ9BXW6 950 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 PCDHGA5Q9Y5G8 931 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.81□□□□□ -0.52
TRIT1-215ENST00000541099 SHROOM3Q8TF72 1996 aa11.81□□□□□ -0.52
TRIT1-215ENST00000541099 PIEZO1Q92508 2521 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 A0A0U1RQS6 177 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 A0A1W2PQU0 124 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 LATO43561 262 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 FZD6O60353 706 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 WNT1P04628 370 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 PDHA1P08559 390 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 GM2AP17900 193 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 RBL1P28749 1068 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 MAT2AP31153 395 aaKnown RBP11.8□□□□□ -0.52
TRIT1-215ENST00000541099 HSPA9P38646 679 aaKnown RBP11.8□□□□□ -0.52
TRIT1-215ENST00000541099 RENBPP51606 427 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 CCR5P51681 352 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 AP1S1P61966 158 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 SKOR1P84550 965 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 RALGDSQ12967 914 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 RPS6KA1Q15418 735 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 ZNF284Q2VY69 593 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 TMEM259Q4ZIN3 620 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 TIGD7Q6NT04 549 aaPredicted RBP11.8□□□□□ -0.52
TRIT1-215ENST00000541099 KDM7AQ6ZMT4 941 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 CYP2U1Q7Z449 544 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 PRPF39Q86UA1 669 aaKnown RBP11.8□□□□□ -0.52
TRIT1-215ENST00000541099 SYT12Q8IV01 421 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 SLC35F6Q8N357 371 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 C17orf53Q8N3J3 647 aaPredicted RBP11.8□□□□□ -0.52
TRIT1-215ENST00000541099 ZCCHC9Q8N567 271 aaKnown RBP11.8□□□□□ -0.52
TRIT1-215ENST00000541099 UBL4BQ8N7F7 174 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 TFB1MQ8WVM0 346 aaKnown RBP11.8□□□□□ -0.52
TRIT1-215ENST00000541099 ANP32BQ92688 251 aaKnown RBP11.8□□□□□ -0.52
TRIT1-215ENST00000541099 P3H4Q92791 437 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 ZNF641Q96N77 438 aaPredicted RBP11.8□□□□□ -0.52
TRIT1-215ENST00000541099 TUBGCP5Q96RT8 1024 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 BRD8Q9H0E9 1235 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 PCED1AQ9H1Q7 454 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 CAAP1Q9H8G2 361 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 USP29Q9HBJ7 922 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 CAPN10Q9HC96 672 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 PCDH12Q9NPG4 1184 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 SCUBE2Q9NQ36 999 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 SEMA4GQ9NTN9 838 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 NCDNQ9UBB6 729 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 GMEB2Q9UKD1 530 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 CA5BQ9Y2D0 317 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.8□□□□□ -0.52
TRIT1-215ENST00000541099 LAMA1P25391 3075 aa11.8□□□□□ -0.52
TRIT1-215ENST00000541099 CFAP54Q96N23 3096 aa11.79□□□□□ -0.52
TRIT1-215ENST00000541099 DOCK9Q9BZ29 2069 aa11.79□□□□□ -0.52
TRIT1-215ENST00000541099 TBC1D3DA0A087WVF3 549 aa11.79□□□□□ -0.52
TRIT1-215ENST00000541099 TBC1D3IA0A087WXS9 549 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms