RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 TCP1P17987 556 aaKnown RBP15.66■□□□□ 0.1
DDB1-218ENST00000540784 XPAP23025 273 aaPredicted RBP15.66■□□□□ 0.1
DDB1-218ENST00000540784 NBL1P41271 181 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 NEK3P51956 506 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 POLR2LP62875 67 aaKnown RBP15.66■□□□□ 0.1
DDB1-218ENST00000540784 DSC2Q02487 901 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 PLK5Q496M5 336 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 SPDYCQ5MJ68 293 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 FAM182AQ5T1J6 154 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 TBC1D3GQ6DHY5 549 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 TBC1D3CQ6IPX1 549 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 TMEFF1Q8IYR6 380 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 TBC1D3Q8IZP1 549 aaPredicted RBP15.66■□□□□ 0.1
DDB1-218ENST00000540784 CADM4Q8NFZ8 388 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 SLC35B2Q8TB61 432 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 C1orf54Q8WWF1 131 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 ZNF419Q96HQ0 510 aaPredicted RBP15.66■□□□□ 0.1
DDB1-218ENST00000540784 MS4A14Q96JA4 679 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 NSMCE3Q96MG7 304 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 NAP1L3Q99457 506 aaPredicted RBP15.66■□□□□ 0.1
DDB1-218ENST00000540784 DUSP15Q9H1R2 295 aaPredicted RBP15.66■□□□□ 0.1
DDB1-218ENST00000540784 EPC1Q9H2F5 836 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 KDM4CQ9H3R0 1056 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 USP29Q9HBJ7 922 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 GLOD4Q9HC38 313 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 HOMER3Q9NSC5 361 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 KLHL8Q9P2G9 620 aaPredicted RBP15.66■□□□□ 0.1
DDB1-218ENST00000540784 DNPEPQ9ULA0 475 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 ZKSCAN5Q9Y2L8 839 aa15.66■□□□□ 0.1
DDB1-218ENST00000540784 A0A1W2PQ67 120 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 CES2O00748 559 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 LIASO43766 372 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 SERPINF2P08697 491 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 ADRB3P13945 408 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 ETF1P62495 437 aaKnown RBP15.65■□□□□ 0.1
DDB1-218ENST00000540784 NIPAL4Q0D2K0 466 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 SNX1Q13596 522 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 CCNG2Q16589 344 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 PIP5KL1Q5T9C9 394 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 AGBL4Q5VU57 503 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 PAPD7Q5XG87 772 aaKnown RBP15.65■□□□□ 0.1
DDB1-218ENST00000540784 ALG1LQ6GMV1 187 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 BRAT1Q6PJG6 821 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 PARS2Q7L3T8 475 aaKnown RBP15.65■□□□□ 0.1
DDB1-218ENST00000540784 ZNF567Q8N184 647 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 RASGEF1CQ8N431 466 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 OR2T34Q8NGX1 318 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 ARRDC2Q8TBH0 407 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 COG1Q8WTW3 980 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 PDCD6IPQ8WUM4 868 aaKnown RBP15.65■□□□□ 0.1
DDB1-218ENST00000540784 ATG4AQ8WYN0 398 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 RAB7BQ96AH8 199 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 FAM131CQ96AQ9 280 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 SLC25A51Q9H1U9 297 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 TTC7AQ9ULT0 858 aaPredicted RBP15.65■□□□□ 0.1
DDB1-218ENST00000540784 ZNF148Q9UQR1 794 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 RAI2Q9Y5P3 530 aa15.65■□□□□ 0.1
DDB1-218ENST00000540784 METTL12A8MUP2 240 aa15.64■□□□□ 0.09
DDB1-218ENST00000540784 TRAFD1O14545 582 aaPredicted RBP15.64■□□□□ 0.09
DDB1-218ENST00000540784 PLRG1O43660 514 aaKnown RBP15.64■□□□□ 0.09
DDB1-218ENST00000540784 SOCS5O75159 536 aa15.64■□□□□ 0.09
DDB1-218ENST00000540784 CASQ1P31415 396 aa15.64■□□□□ 0.09
DDB1-218ENST00000540784 STIP1P31948 543 aaKnown RBP15.64■□□□□ 0.09
DDB1-218ENST00000540784 CD86P42081 329 aa15.64■□□□□ 0.09
DDB1-218ENST00000540784 DHPSP49366 369 aaPredicted RBP15.64■□□□□ 0.09
DDB1-218ENST00000540784 SUOXP51687 545 aa15.64■□□□□ 0.09
DDB1-218ENST00000540784 ADPRHP54922 357 aa15.64■□□□□ 0.09
DDB1-218ENST00000540784 NHLH1Q02575 133 aa15.64■□□□□ 0.09
DDB1-218ENST00000540784 LPAL2Q16609 132 aa15.64■□□□□ 0.09
DDB1-218ENST00000540784 UGP2Q16851 508 aa15.64■□□□□ 0.09
DDB1-218ENST00000540784 ARMC12Q5T9G4 340 aa15.64■□□□□ 0.09
DDB1-218ENST00000540784 FAM71DQ8N9W8 422 aa15.64■□□□□ 0.09
DDB1-218ENST00000540784 FOXJ1Q92949 421 aa15.64■□□□□ 0.09
DDB1-218ENST00000540784 IMP4Q96G21 291 aaKnown RBP15.64■□□□□ 0.09
DDB1-218ENST00000540784 PCED1AQ9H1Q7 454 aa15.64■□□□□ 0.09
DDB1-218ENST00000540784 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.64■□□□□ 0.09
DDB1-218ENST00000540784 SAR1BQ9Y6B6 198 aa15.64■□□□□ 0.09
DDB1-218ENST00000540784 TSPAN11A1L157 253 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 CFAP69A5D8W1 941 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 PRR23AA6NEV1 266 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 C5orf60A6NFR6 353 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 NEMP1O14524 444 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 ZNF185O15231 689 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 HTRA2O43464 458 aaPredicted RBP15.63■□□□□ 0.09
DDB1-218ENST00000540784 PCDH8O95206 1070 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 CA4P22748 312 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 TAS2R38P59533 333 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 SKOR1P84550 965 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 TRAF2Q12933 501 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 SIX1Q15475 284 aaPredicted RBP15.63■□□□□ 0.09
DDB1-218ENST00000540784 ANKRD20A2Q5SQ80 823 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 SYCP2LQ5T4T6 812 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 ANKRD20A1Q5TYW2 823 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 ANKRD20A3Q5VUR7 823 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 PMS2CLQ68D20 193 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 KIAA0895LQ68EN5 471 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 ITPRIPL1Q6GPH6 555 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 NEK5Q6P3R8 708 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 SYT10Q6XYQ8 523 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 NDUFAF2Q8N183 169 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms