RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 TEDDM1Q5T9Z0 273 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 PACS1Q6VY07 963 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 KCNMB4Q86W47 210 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 CCDC117Q8IWD4 279 aaPredicted RBP24.78■■□□□ 1.56
TTC3-225ENST00000540756 NAT16Q8N8M0 369 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 OR6K2Q8NGY2 324 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 MYLIPQ8WY64 445 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 FEM1CQ96JP0 617 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 INTS9Q9NV88 658 aaKnown RBP24.78■■□□□ 1.56
TTC3-225ENST00000540756 KCTD3Q9Y597 815 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 PAPLNO95428 1278 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 MT-ND3P03897 115 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 ADRA1DP25100 572 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 RPA3P35244 121 aaPredicted RBP24.78■■□□□ 1.56
TTC3-225ENST00000540756 ABCG1P45844 678 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 STK19P49842 368 aaPredicted RBP24.78■■□□□ 1.56
TTC3-225ENST00000540756 SEC24CP53992 1094 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 FUT11Q495W5 492 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 TCEAL5Q5H9L2 206 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 FAM78AQ5JUQ0 283 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 SH2D5Q6ZV89 423 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 CDKL2Q92772 493 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 FGF13Q92913 245 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 NUDCD1Q96RS6 583 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 IARS2Q9NSE4 1012 aaKnown RBP24.78■■□□□ 1.56
TTC3-225ENST00000540756 TREX1Q9NSU2 369 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 TYROBPO43914 113 aa24.77■■□□□ 1.56
TTC3-225ENST00000540756 VAPBO95292 243 aa24.77■■□□□ 1.56
TTC3-225ENST00000540756 PRLP01236 227 aa24.77■■□□□ 1.56
TTC3-225ENST00000540756 PYGBP11216 843 aa24.77■■□□□ 1.56
TTC3-225ENST00000540756 RHOAP61586 193 aa24.77■■□□□ 1.56
TTC3-225ENST00000540756 PITRM1Q5JRX3 1037 aa24.77■■□□□ 1.56
TTC3-225ENST00000540756 TDHQ8IZJ6 230 aa24.77■■□□□ 1.56
TTC3-225ENST00000540756 ASIC4Q96FT7 647 aa24.77■■□□□ 1.56
TTC3-225ENST00000540756 CCL22O00626 93 aa24.76■■□□□ 1.55
TTC3-225ENST00000540756 SNRPAP09012 282 aaKnown RBP24.76■■□□□ 1.55
TTC3-225ENST00000540756 ARCN1P48444 511 aaKnown RBP24.76■■□□□ 1.55
TTC3-225ENST00000540756 PTPRCAPQ14761 206 aa24.76■■□□□ 1.55
TTC3-225ENST00000540756 PTPRRQ15256 657 aa24.76■■□□□ 1.55
TTC3-225ENST00000540756 SYCE2Q6PIF2 218 aa24.76■■□□□ 1.55
TTC3-225ENST00000540756 GET4Q7L5D6 327 aaPredicted RBP24.76■■□□□ 1.55
TTC3-225ENST00000540756 CELF5Q8N6W0 485 aaKnown RBP24.76■■□□□ 1.55
TTC3-225ENST00000540756 TBC1D14Q9P2M4 693 aa24.76■■□□□ 1.55
TTC3-225ENST00000540756 PRKAG3Q9UGI9 489 aa24.76■■□□□ 1.55
TTC3-225ENST00000540756 PRUNE2Q8WUY3 3088 aa24.76■■□□□ 1.55
TTC3-225ENST00000540756 BUD23O43709 281 aaKnown RBP24.76■■□□□ 1.55
TTC3-225ENST00000540756 KRT37O76014 449 aa24.76■■□□□ 1.55
TTC3-225ENST00000540756 FSHRP23945 695 aa24.76■■□□□ 1.55
TTC3-225ENST00000540756 RETSATQ6NUM9 610 aa24.76■■□□□ 1.55
TTC3-225ENST00000540756 PNPLA1Q8N8W4 532 aa24.76■■□□□ 1.55
TTC3-225ENST00000540756 GDAP1Q8TB36 358 aa24.76■■□□□ 1.55
TTC3-225ENST00000540756 BLOC1S5Q8TDH9 187 aa24.76■■□□□ 1.55
TTC3-225ENST00000540756 ATXN7L3BQ96GX2 97 aa24.76■■□□□ 1.55
TTC3-225ENST00000540756 ZFYVE19Q96K21 471 aa24.76■■□□□ 1.55
TTC3-225ENST00000540756 TDRD1Q9BXT4 1180 aaKnown RBP24.76■■□□□ 1.55
TTC3-225ENST00000540756 SENP1Q9P0U3 644 aa24.76■■□□□ 1.55
TTC3-225ENST00000540756 RAI2Q9Y5P3 530 aa24.76■■□□□ 1.55
TTC3-225ENST00000540756 FAM47DPA6NHR8 397 aa24.75■■□□□ 1.55
TTC3-225ENST00000540756 ZNF821O75541 412 aaPredicted RBP24.75■■□□□ 1.55
TTC3-225ENST00000540756 RFPL1O75677 317 aa24.75■■□□□ 1.55
TTC3-225ENST00000540756 TCF3P15923 654 aa24.75■■□□□ 1.55
TTC3-225ENST00000540756 GKP32189 559 aa24.75■■□□□ 1.55
TTC3-225ENST00000540756 TRAF2Q12933 501 aa24.75■■□□□ 1.55
TTC3-225ENST00000540756 FRG1Q14331 258 aaKnown RBP24.75■■□□□ 1.55
TTC3-225ENST00000540756 NCEH1Q6PIU2 408 aa24.75■■□□□ 1.55
TTC3-225ENST00000540756 ACDQ96AP0 544 aa24.75■■□□□ 1.55
TTC3-225ENST00000540756 CDCA3Q99618 268 aaPredicted RBP24.75■■□□□ 1.55
TTC3-225ENST00000540756 TNKS2Q9H2K2 1166 aa24.75■■□□□ 1.55
TTC3-225ENST00000540756 ARL5AQ9Y689 179 aa24.75■■□□□ 1.55
TTC3-225ENST00000540756 EPOP01588 193 aa24.74■■□□□ 1.55
TTC3-225ENST00000540756 PLK1P53350 603 aa24.74■■□□□ 1.55
TTC3-225ENST00000540756 WDR4P57081 412 aaKnown RBP24.74■■□□□ 1.55
TTC3-225ENST00000540756 STRA8Q7Z7C7 330 aa24.74■■□□□ 1.55
TTC3-225ENST00000540756 BANPQ8N9N5 519 aa24.74■■□□□ 1.55
TTC3-225ENST00000540756 OR13J1Q8NGT2 312 aa24.74■■□□□ 1.55
TTC3-225ENST00000540756 PDCD6IPQ8WUM4 868 aaKnown RBP24.74■■□□□ 1.55
TTC3-225ENST00000540756 ASB16Q96NS5 453 aa24.74■■□□□ 1.55
TTC3-225ENST00000540756 MRM3Q9HC36 420 aaKnown RBP24.74■■□□□ 1.55
TTC3-225ENST00000540756 HAUS2Q9NVX0 235 aa24.74■■□□□ 1.55
TTC3-225ENST00000540756 ZMYM5Q9UJ78 669 aa24.74■■□□□ 1.55
TTC3-225ENST00000540756 HEATR9A2RTY3 570 aa24.74■■□□□ 1.55
TTC3-225ENST00000540756 PRPF4O43172 522 aaKnown RBP eCLIP24.74■■□□□ 1.555e-17■■□□□ 14.5
TTC3-225ENST00000540756 LDB2O43679 373 aa24.74■■□□□ 1.55
TTC3-225ENST00000540756 KRT38O76015 456 aa24.74■■□□□ 1.55
TTC3-225ENST00000540756 NDST3O95803 873 aa24.74■■□□□ 1.55
TTC3-225ENST00000540756 HLA-DPA1P20036 260 aa24.74■■□□□ 1.55
TTC3-225ENST00000540756 CA4P22748 312 aa24.74■■□□□ 1.55
TTC3-225ENST00000540756 WEE1P30291 646 aa24.74■■□□□ 1.55
TTC3-225ENST00000540756 NSUN2Q08J23 767 aaKnown RBP eCLIP24.74■■□□□ 1.55
TTC3-225ENST00000540756 DGKKQ5KSL6 1271 aa24.74■■□□□ 1.55
TTC3-225ENST00000540756 GPR149Q86SP6 731 aa24.74■■□□□ 1.55
TTC3-225ENST00000540756 DENND1AQ8TEH3 1009 aa24.74■■□□□ 1.55
TTC3-225ENST00000540756 PTCD2Q8WV60 388 aaKnown RBP24.74■■□□□ 1.55
TTC3-225ENST00000540756 DUS2Q9NX74 493 aaKnown RBP24.74■■□□□ 1.55
TTC3-225ENST00000540756 SPO11Q9Y5K1 396 aa24.74■■□□□ 1.55
TTC3-225ENST00000540756 DOCK8Q8NF50 2099 aa24.74■■□□□ 1.55
TTC3-225ENST00000540756 A0A0U1RQS6 177 aa24.73■■□□□ 1.55
TTC3-225ENST00000540756 MROH6A6NGR9 719 aa24.73■■□□□ 1.55
TTC3-225ENST00000540756 AURKAO14965 403 aa24.73■■□□□ 1.55
TTC3-225ENST00000540756 FGF1P05230 155 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms