RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 PARS2Q7L3T8 475 aaKnown RBP10.52□□□□□ -0.73
CDCA3-208ENST00000540683 ZNF571Q7Z3V5 609 aaPredicted RBP10.52□□□□□ -0.73
CDCA3-208ENST00000540683 SLCO6A1Q86UG4 719 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 FAM72BQ86X60 149 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 GATAD2AQ86YP4 633 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 MAP7D3Q8IWC1 876 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 NDUFAF2Q8N183 169 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 EID2Q8N6I1 236 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 OR4C6Q8NH72 309 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 TPCN2Q8NHX9 752 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 WDR48Q8TAF3 677 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 TEKT4Q8WW24 435 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 HMCESQ96FZ2 354 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 KLHL32Q96NJ5 620 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 CINPQ9BW66 212 aaPredicted RBP10.52□□□□□ -0.73
CDCA3-208ENST00000540683 NLGN3Q9NZ94 848 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 RCOR3Q9P2K3 495 aaPredicted RBP10.52□□□□□ -0.73
CDCA3-208ENST00000540683 SPASTQ9UBP0 616 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 SEPT3Q9UH03 358 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 CAPN11Q9UMQ6 739 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 BTBD3Q9Y2F9 522 aa10.52□□□□□ -0.73
CDCA3-208ENST00000540683 USP24Q9UPU5 2620 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 SPTY2D1-AS1A0A0U1RR47 76 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 KCNK3O14649 394 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 GJB6O95452 261 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 SPINK2P20155 84 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 CA4P22748 312 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 CES1P23141 567 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 KELP23276 732 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 DGKAP23743 735 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 ACP1P24666 158 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 MIPP30301 263 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 METAP1P53582 386 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 AP1S1P61966 158 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 BCL2L1Q07817 233 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 IL10RBQ08334 325 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 PEX6Q13608 980 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 NFKBIBQ15653 356 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 DPYSL2Q16555 572 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 ZCCHC8Q6NZY4 707 aaKnown RBP10.51□□□□□ -0.73
CDCA3-208ENST00000540683 NIPA2Q8N8Q9 360 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 PNPLA1Q8N8W4 532 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 FAM181AQ8N9Y4 354 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 SLC13A1Q9BZW2 595 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 ABCG4Q9H172 646 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 DEF6Q9H4E7 631 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 SUV39H2Q9H5I1 410 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 LRRC19Q9H756 370 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 CBX8Q9HC52 389 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 NDFIP2Q9NV92 336 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 DNAJC28Q9NX36 388 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 NEU3Q9UQ49 428 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 SLCO1B1Q9Y6L6 691 aa10.51□□□□□ -0.73
CDCA3-208ENST00000540683 FAM170AA1A519 330 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 IGLON5A6NGN9 336 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 PDE2AO00408 941 aaPredicted RBP10.5□□□□□ -0.73
CDCA3-208ENST00000540683 TPP1O14773 563 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 AREL1O15033 823 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 SCAMP1O15126 338 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 ZW10O43264 779 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 NEBLO76041 1014 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 CD160O95971 181 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 CSF2P04141 144 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 ALPIP09923 528 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 NME1P15531 152 aaKnown RBP10.5□□□□□ -0.73
CDCA3-208ENST00000540683 ACADVLP49748 655 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 PDE1CQ14123 709 aaPredicted RBP10.5□□□□□ -0.73
CDCA3-208ENST00000540683 ZNF235Q14590 738 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 LRRC14Q15048 493 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 ELOCQ15369 112 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 UGP2Q16851 508 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 TMEM52BQ4KMG9 183 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 CCDC157Q569K6 752 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 SEL1L3Q68CR1 1132 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 LVRNQ6Q4G3 990 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 PROSER1Q86XN7 944 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 SPATS2Q86XZ4 545 aaKnown RBP10.5□□□□□ -0.73
CDCA3-208ENST00000540683 PYROXD2Q8N2H3 581 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 FSTL5Q8N475 847 aaPredicted RBP10.5□□□□□ -0.73
CDCA3-208ENST00000540683 OR13H1Q8NG92 308 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 OR6C4Q8NGE1 309 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 CTNNBL1Q8WYA6 563 aaPredicted RBP10.5□□□□□ -0.73
CDCA3-208ENST00000540683 NAT6Q93015 286 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 MS4A3Q96HJ5 214 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 NAP1L5Q96NT1 182 aaPredicted RBP10.5□□□□□ -0.73
CDCA3-208ENST00000540683 IL12RB2Q99665 862 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 FUCA2Q9BTY2 467 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 SNRNP25Q9BV90 132 aaKnown RBP10.5□□□□□ -0.73
CDCA3-208ENST00000540683 TMEM121BQ9BXQ6 578 aaPredicted RBP10.5□□□□□ -0.73
CDCA3-208ENST00000540683 NRSN2Q9GZP1 204 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 TOR4AQ9NXH8 423 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 TAS2R14Q9NYV8 317 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 UVRAGQ9P2Y5 699 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 MYO1AQ9UBC5 1043 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 PCSK1NQ9UHG2 260 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 DNPEPQ9ULA0 475 aa10.5□□□□□ -0.73
CDCA3-208ENST00000540683 ZFR2Q9UPR6 939 aaKnown RBP10.5□□□□□ -0.73
CDCA3-208ENST00000540683 TSPAN11A1L157 253 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 DFFAO00273 331 aa10.49□□□□□ -0.73
CDCA3-208ENST00000540683 DDX3XO00571 662 aaKnown RBP eCLIP10.49□□□□□ -0.734e-11■□□□□ 9.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms