RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 MUC3BQ9H195 1237 aa17.24■□□□□ 0.35
EPB41L3-204ENST00000540638 CDYLQ9Y232 598 aa17.24■□□□□ 0.35
EPB41L3-204ENST00000540638 GOLGA4Q13439 2230 aaKnown RBP17.24■□□□□ 0.35
EPB41L3-204ENST00000540638 F5H5T6 163 aa17.24■□□□□ 0.35
EPB41L3-204ENST00000540638 JUNP05412 331 aaKnown RBP17.24■□□□□ 0.35
EPB41L3-204ENST00000540638 CASP2P42575 452 aa17.24■□□□□ 0.35
EPB41L3-204ENST00000540638 SLC34A1Q06495 639 aa17.24■□□□□ 0.35
EPB41L3-204ENST00000540638 NAB1Q13506 487 aa17.24■□□□□ 0.35
EPB41L3-204ENST00000540638 FAM83EQ2M2I3 478 aa17.24■□□□□ 0.35
EPB41L3-204ENST00000540638 RASIP1Q5U651 963 aa17.24■□□□□ 0.35
EPB41L3-204ENST00000540638 TMEM173Q86WV6 379 aaPredicted RBP17.24■□□□□ 0.35
EPB41L3-204ENST00000540638 OR13C4Q8NGS5 318 aa17.24■□□□□ 0.35
EPB41L3-204ENST00000540638 OR6K2Q8NGY2 324 aa17.24■□□□□ 0.35
EPB41L3-204ENST00000540638 UBE2OQ9C0C9 1292 aaKnown RBP17.24■□□□□ 0.35
EPB41L3-204ENST00000540638 YIPF3Q9GZM5 350 aa17.24■□□□□ 0.35
EPB41L3-204ENST00000540638 SF3B1O75533 1304 aaKnown RBP eCLIP17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 M0QZQ0 153 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 SLC35E2BP0CK96 405 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 SLC2A3P11169 496 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 GFAPP14136 432 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 CSE1LP55060 971 aaKnown RBP17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 CD300LGQ6UXG3 332 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 IZUMO2Q6UXV1 221 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 MAGEC3Q8TD91 643 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 FAM96AQ9H5X1 160 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 ZBTB14O43829 449 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 DLX3O60479 287 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 GSRP00390 522 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 COX4I1P13073 169 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 ALDH7A1P49419 539 aaKnown RBP17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 ARSDP51689 593 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 TRIP10Q15642 601 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 LSM12Q3MHD2 195 aaKnown RBP17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 CLEC6AQ6EIG7 209 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 DDIASQ8IXT1 998 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 PCDH20Q8N6Y1 951 aaKnown RBP17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 DCBLD1Q8N8Z6 715 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 PGAP3Q96FM1 320 aaPredicted RBP17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 DNAJC1Q96KC8 554 aaKnown RBP17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 PANX3Q96QZ0 392 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 RGS18Q9NS28 235 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 CCDC167Q9P0B6 97 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 DLGAP2Q9P1A6 1054 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 ANGPTL2Q9UKU9 493 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 PCDHB12Q9Y5F1 795 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 HEATR9A2RTY3 570 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 G3V2L1 256 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 CYP2C18P33260 490 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 RTP2Q5QGT7 225 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 LIPMQ5VYY2 423 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 UROC1Q96N76 676 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 CDRT15Q96T59 188 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 CCDC106Q9BWC9 280 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 CRISPLD1Q9H336 500 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 PRDM16Q9HAZ2 1276 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 ARHGAP26Q9UNA1 814 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 AK5Q9Y6K8 562 aa17.23■□□□□ 0.35
EPB41L3-204ENST00000540638 STX16-NPEPL1H3BU86 382 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 HDCP19113 662 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 CDK7P50613 346 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 KLF10Q13118 480 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 KIF19Q2TAC6 998 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 FUT10Q6P4F1 479 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 TAS1R1Q7RTX1 841 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 RCN3Q96D15 328 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 NCKIPSDQ9NZQ3 722 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 GLDCP23378 1020 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 HARS2P49590 506 aaKnown RBP17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 HTRA3P83110 453 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 INSCQ1MX18 579 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 LRRC8DQ7L1W4 858 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 GABPB2Q8TAK5 448 aaPredicted RBP17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 ESAMQ96AP7 390 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 SLC24A3Q9HC58 644 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 PLK2Q9NYY3 685 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 PPM1HQ9ULR3 514 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 PCDHGC4Q9Y5F7 938 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 RAD54BQ9Y620 910 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 HDAC3O15379 428 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 TM7SF2O76062 418 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 INHAP05111 366 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 SLC11A1P49279 550 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 PDAP1Q13442 181 aaKnown RBP17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 PTPRRQ15256 657 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 LPCAT4Q643R3 524 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 TMEM154Q6P9G4 183 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 POTEHQ6S545 545 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 TAS2R42Q7RTR8 314 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 LPCAT1Q8NF37 534 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 GPR22Q99680 433 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 KIFC1Q9BW19 673 aa17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 MRPL46Q9H2W6 279 aaKnown RBP17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 HMX1Q9NP08 348 aaPredicted RBP17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 MARCH4Q9P2E8 410 aaPredicted RBP17.22■□□□□ 0.35
EPB41L3-204ENST00000540638 PLD1Q13393 1074 aa17.21■□□□□ 0.35
EPB41L3-204ENST00000540638 RPS6KA2Q15349 733 aa17.21■□□□□ 0.35
EPB41L3-204ENST00000540638 SPATA24Q86W54 205 aa17.21■□□□□ 0.35
EPB41L3-204ENST00000540638 AUTS2Q8WXX7 1259 aa17.21■□□□□ 0.35
EPB41L3-204ENST00000540638 NPAS2Q99743 824 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms