RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 A0A0G2JMZ2 1700 aa14.25□□□□□ -0.13
INO80E-203ENST00000540562 LRRC37A2A6NM11 1700 aa14.25□□□□□ -0.13
INO80E-203ENST00000540562 FBXO21O94952 628 aa14.25□□□□□ -0.13
INO80E-203ENST00000540562 CPB1P15086 417 aa14.25□□□□□ -0.13
INO80E-203ENST00000540562 THPOP40225 353 aa14.25□□□□□ -0.13
INO80E-203ENST00000540562 SLC10A7Q0GE19 358 aa14.25□□□□□ -0.13
INO80E-203ENST00000540562 NEPROQ6NW34 567 aa14.25□□□□□ -0.13
INO80E-203ENST00000540562 HDAC11Q96DB2 347 aa14.25□□□□□ -0.13
INO80E-203ENST00000540562 SMARCD1Q96GM5 515 aa14.25□□□□□ -0.13
INO80E-203ENST00000540562 MPP4Q96JB8 637 aa14.25□□□□□ -0.13
INO80E-203ENST00000540562 MARCH4Q9P2E8 410 aaPredicted RBP14.25□□□□□ -0.13
INO80E-203ENST00000540562 RCOR3Q9P2K3 495 aaPredicted RBP14.25□□□□□ -0.13
INO80E-203ENST00000540562 LZTS1Q9Y250 596 aa14.25□□□□□ -0.13
INO80E-203ENST00000540562 C5orf42Q9H799 3197 aa14.25□□□□□ -0.13
INO80E-203ENST00000540562 SAC3D1A6NKF1 404 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 ZNF839A8K0R7 811 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 SNUPNO95149 360 aaKnown RBP14.24□□□□□ -0.13
INO80E-203ENST00000540562 CLIC3O95833 236 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 HAPLN1P10915 354 aaPredicted RBP14.24□□□□□ -0.13
INO80E-203ENST00000540562 KCNE1P15382 129 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 WNT3AP56704 352 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 PRKAA1Q13131 559 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 SEMA3BQ13214 749 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 GALNT3Q14435 633 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 AGMOQ6ZNB7 445 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 ZNF512Q96ME7 567 aaPredicted RBP14.24□□□□□ -0.13
INO80E-203ENST00000540562 CNGB3Q9NQW8 809 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 SORCS3Q9UPU3 1222 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 M0QZ92 97 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 TIPRLO75663 272 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 CHN2P52757 468 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 SLC5A3P53794 718 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 CDH15P55291 814 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 EFEMP1Q12805 493 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 RBBP5Q15291 538 aaKnown RBP14.24□□□□□ -0.13
INO80E-203ENST00000540562 DDIASQ8IXT1 998 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 CFAP52Q8N1V2 620 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 NUDT8Q8WV74 236 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 HDAC10Q969S8 669 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 NSUN5Q96P11 429 aaKnown RBP14.24□□□□□ -0.13
INO80E-203ENST00000540562 GLOD4Q9HC38 313 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 STK39Q9UEW8 545 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 IPO11Q9UI26 975 aaKnown RBP14.24□□□□□ -0.13
INO80E-203ENST00000540562 FAM50BQ9Y247 325 aa14.24□□□□□ -0.13
INO80E-203ENST00000540562 A0A1W2PQH9 124 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 UBA6A0AVT1 1052 aaPredicted RBP14.23□□□□□ -0.13
INO80E-203ENST00000540562 ERI2A8K979 691 aaKnown RBP14.23□□□□□ -0.13
INO80E-203ENST00000540562 PSMC3P17980 439 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 ME2P23368 584 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 CD151P48509 253 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 RAB27AP51159 221 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 ROR2Q01974 943 aaKnown RBP14.23□□□□□ -0.13
INO80E-203ENST00000540562 PSMD5Q16401 504 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 ZNF423Q2M1K9 1284 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 SLC39A12Q504Y0 691 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 ALFQ53S48 1182 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 IQSEC1Q6DN90 963 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 BHLHA9Q7RTU4 235 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 KDM1BQ8NB78 822 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 SHCBP1Q8NEM2 672 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 BHMTQ93088 406 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 NR1H4Q96RI1 486 aaPredicted RBP14.23□□□□□ -0.13
INO80E-203ENST00000540562 RTP3Q9BQQ7 232 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 NOL11Q9H8H0 719 aaKnown RBP14.23□□□□□ -0.13
INO80E-203ENST00000540562 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.23□□□□□ -0.13
INO80E-203ENST00000540562 TCAF2A6NFQ2 919 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 NR5A2O00482 541 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 GABRDO14764 452 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 STRNO43815 780 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 MGEA5O60502 916 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 PBX3P40426 434 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 MAPK10P53779 464 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 FASTKQ14296 549 aaKnown RBP14.23□□□□□ -0.13
INO80E-203ENST00000540562 GRB14Q14449 540 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 FSCN1Q16658 493 aaKnown RBP14.23□□□□□ -0.13
INO80E-203ENST00000540562 SLC5A9Q2M3M2 681 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 FUT11Q495W5 492 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 PCID2Q5JVF3 399 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 RARS2Q5T160 578 aaKnown RBP14.23□□□□□ -0.13
INO80E-203ENST00000540562 DENND5AQ6IQ26 1287 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 C16orf89Q6UX73 402 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 ARHGAP12Q8IWW6 846 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 STYXQ8WUJ0 223 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 PDCD6IPQ8WUM4 868 aaKnown RBP14.23□□□□□ -0.13
INO80E-203ENST00000540562 PSMG2Q969U7 264 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 SERPINI1Q99574 410 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 CAAP1Q9H8G2 361 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 OSER1Q9NX31 292 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 HHLA1C9JL84 531 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 PDLIM1O00151 329 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 SDHDO14521 159 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 MAFKO60675 156 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 CLPTM1O96005 669 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 NPY2RP49146 381 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 INHBEP58166 350 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 SATB1Q01826 763 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 SULT2A1Q06520 285 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 AAGABQ6PD74 315 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 NUP93Q8N1F7 819 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 MRGPRX2Q96LB1 330 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms