RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 DUSP7Q16829 419 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 LLGL2Q6P1M3 1020 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 FAM71AQ8IYT1 594 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 PDIK1LQ8N165 341 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 NDUFAF2Q8N183 169 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 CADM2Q8N3J6 435 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 LINC00469Q8N7U9 141 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 VTI1AQ96AJ9 217 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 SLCO4A1Q96BD0 722 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 RCN3Q96D15 328 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 OMA1Q96E52 524 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 SORT1Q99523 831 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 LXNQ9BS40 222 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 CHID1Q9BWS9 393 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 NARFLQ9H6Q4 476 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 WDR41Q9HAD4 459 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 TUFT1Q9NNX1 390 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 UCKL1Q9NWZ5 548 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 GABRQQ9UN88 632 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 BOLA1Q9Y3E2 137 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 PCDHA10Q9Y5I2 948 aa9.57□□□□□ -0.88
CTNNA1-243ENST00000540387 TRIM77I1YAP6 450 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 PIK3R2O00459 728 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 PHGDHO43175 533 aaKnown RBP9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 PROSCO94903 275 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 GSRP00390 522 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 P4HBP07237 508 aaKnown RBP9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 TMEM191BP0C7N4 346 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 ATF7P17544 494 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 RRM2P31350 389 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 CRHR1P34998 444 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 ADCYAP1R1P41586 468 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 FCGRTP55899 365 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 GPLD1P80108 840 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 MERTKQ12866 999 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 BFSP1Q12934 665 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 UGCGQ16739 394 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 AASDHQ4L235 1098 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 GTF2IRD2BQ6EKJ0 949 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 SWSAP1Q6NVH7 229 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 GTF2IRD2Q86UP8 949 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 MFSD2AQ8NA29 543 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 HDAC11Q96DB2 347 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 VMP1Q96GC9 406 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 DEPDC7Q96QD5 511 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 SEZ6LQ9BYH1 1024 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 SYTL2Q9HCH5 934 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 PKD2L2Q9NZM6 624 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 TCEAL9Q9UHQ7 104 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 CAB39Q9Y376 341 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 RGSL1A5PLK6 1076 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 BCAS1O75363 584 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 ARNTP27540 789 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 SFNP31947 248 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 NUDT1P36639 197 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 OR3A3P47888 321 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 FLT3LGP49771 235 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 JAK3P52333 1124 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 DSTNP60981 165 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 MMRN1Q13201 1228 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 TTLL4Q14679 1199 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 HSDL1Q3SXM5 330 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 KIAA1841Q6NSI8 718 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 FAM122CQ6P4D5 195 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 ABRAXAS1Q6UWZ7 409 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 ABHD15Q6UXT9 468 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 BRSK2Q8IWQ3 736 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 OFCC1Q8IZS5 231 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 FAM109AQ8N4B1 249 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 ANKFN1Q8N957 763 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 RDH13Q8NBN7 331 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 JPH3Q8WXH2 748 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 SOCS4Q8WXH5 440 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 CFAP36Q96G28 342 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 FBXL20Q96IG2 436 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 MARK4Q96L34 752 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 UHRF1Q96T88 793 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 SH2D3AQ9BRG2 576 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 LHPPQ9H008 270 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 ABHD16BQ9H3Z7 469 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 COPG2Q9UBF2 871 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 ZNF221Q9UK13 617 aa9.56□□□□□ -0.88
CTNNA1-243ENST00000540387 SAC3D1A6NKF1 404 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 CXorf49A8MYA2 514 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 GPR25O00155 361 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 ITGAVP06756 1048 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 MBL2P11226 248 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 CYP11B1P15538 503 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 JUNBP17275 347 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 ARRB2P32121 409 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 HLCSP50747 726 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 MLLT6P55198 1093 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 RHDQ02161 417 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 SLC36A3Q495N2 470 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 ATP13A4Q4VNC1 1196 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 PAGE2BQ5JRK9 111 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 CELF3Q5SZQ8 465 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 NXNQ6DKJ4 435 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms