RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 HDDC3Q8N4P3 179 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 ACTL9Q8TC94 416 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 TFB1MQ8WVM0 346 aaKnown RBP7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 NSMCE3Q96MG7 304 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 TUBGCP5Q96RT8 1024 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 IL12RB2Q99665 862 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 OMDQ99983 421 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 FAM118BQ9BPY3 351 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 HDAC8Q9BY41 377 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 POLR1EQ9GZS1 481 aaKnown RBP7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 BTBD1Q9H0C5 482 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 NEUROG2Q9H2A3 272 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 SEMA4AQ9H3S1 761 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 SGK2Q9HBY8 427 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 NT5MQ9NPB1 228 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 KCND1Q9NSA2 647 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 NCKAP1Q9Y2A7 1128 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 ATP8A1Q9Y2Q0 1164 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 JRKLQ9Y4A0 524 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 PCDHGA4Q9Y5G9 962 aa7.06□□□□□ -1.28
LPCAT3-209ENST00000540060 LRP4O75096 1905 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 OTOGLQ3ZCN5 2332 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 TTC24A2A3L6 582 aaPredicted RBP7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 PRR23AA6NEV1 266 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 GOLGA8CPA6NN73 597 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 C16orf96A6NNT2 1141 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 TRAFD1O14545 582 aaPredicted RBP7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 KCNK3O14649 394 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 SPINT1O43278 529 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 KIF5CO60282 957 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 SOCS5O75159 536 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 NDUFS2O75306 463 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 EPN2O95208 641 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 LMNAP02545 664 aaKnown RBP7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 ATP1A1P05023 1023 aaKnown RBP7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 IGHV4-34P06331 123 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 ADRB3P13945 408 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 PTPN3P26045 913 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 SERPINA4P29622 427 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 ABL2P42684 1182 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 PTGER3P43115 390 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 SCNN1BP51168 640 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 NEK3P51956 506 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 TAS2R38P59533 333 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 DSC2Q02487 901 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 WASHC5Q12768 1159 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 XRCC4Q13426 336 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 IHHQ14623 411 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 LPAL2Q16609 132 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 ZNF569Q5MCW4 686 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 FAM182AQ5T1J6 154 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 CCDC181Q5TID7 509 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 NCEH1Q6PIU2 408 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 GDPD4Q6W3E5 623 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 ERN2Q76MJ5 926 aaKnown RBP7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 LPCAT2Q7L5N7 544 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 ZSWIM9Q86XI8 627 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 SLC13A5Q86YT5 568 aaPredicted RBP7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 CAMK1DQ8IU85 385 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 SLC41A1Q8IVJ1 513 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 TMEFF1Q8IYR6 380 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 CNTD1Q8N815 330 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 TTC13Q8NBP0 860 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 CADM4Q8NFZ8 388 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 OR2T34Q8NGX1 318 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 ARRDC2Q8TBH0 407 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 GANCQ8TET4 914 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 HTR3CQ8WXA8 447 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 NKD2Q969F2 451 aaPredicted RBP7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 ECHDC3Q96DC8 303 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 HSPA12BQ96MM6 686 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 ZNF641Q96N77 438 aaPredicted RBP7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 KLHL32Q96NJ5 620 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 GPR174Q9BXC1 333 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 CEP41Q9BYV8 373 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 PCED1AQ9H1Q7 454 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 KDM4CQ9H3R0 1056 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 C6orf106Q9H6K1 298 aaPredicted RBP7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 ATP13A3Q9H7F0 1226 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 NOD2Q9HC29 1040 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 DYRK4Q9NR20 520 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 HAUS2Q9NVX0 235 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 RBM22Q9NW64 420 aaKnown RBP eCLIP7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 SEPT10Q9P0V9 454 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 DKK3Q9UBP4 350 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 R3HDM2Q9Y2K5 976 aaKnown RBP7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 SDK1Q7Z5N4 2213 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 RIF1Q5UIP0 2472 aaKnown RBP7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 TRPM6Q9BX84 2022 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 GVINP1Q7Z2Y8 2422 aa7.05□□□□□ -1.28
LPCAT3-209ENST00000540060 ATXN2Q99700 1313 aaKnown RBP7.04□□□□□ -1.28
LPCAT3-209ENST00000540060 GON4LQ3T8J9 2241 aa7.04□□□□□ -1.28
LPCAT3-209ENST00000540060 DNAH14Q0VDD8 3507 aa7.04□□□□□ -1.28
LPCAT3-209ENST00000540060 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.04□□□□□ -1.28
LPCAT3-209ENST00000540060 BCLAF3A2AJT9 711 aaKnown RBP7.04□□□□□ -1.28
LPCAT3-209ENST00000540060 LRRC72A6NJI9 287 aa7.04□□□□□ -1.28
LPCAT3-209ENST00000540060 MEI4A8MW99 385 aa7.04□□□□□ -1.28
LPCAT3-209ENST00000540060 H7C0C1 242 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms