RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 DMDP11532 3685 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 FAM170BA6NMN3 283 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 STK25O00506 426 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 SIN3BO75182 1162 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 POP4O95707 220 aaKnown RBP19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 AP2A1O95782 977 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 EPHX1P07099 455 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 CHRNB1P11230 501 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 TPSB2P20231 275 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 NTSR1P30989 418 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 NUBP1P53384 320 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 PLTPP55058 493 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 WNT3AP56704 352 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 MRPS21P82921 87 aaKnown RBP19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 CALCOCO2Q13137 446 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 MPP3Q13368 585 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 TPSAB1Q15661 275 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 PCSK7Q16549 785 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 IFT20Q8IY31 132 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 GPR161Q8N6U8 529 aaKnown RBP19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 IPMKQ8NFU5 416 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 IFT81Q8WYA0 676 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 PRCCQ92733 491 aaPredicted RBP19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 ART4Q93070 314 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 MRGPRX2Q96LB1 330 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 NEUROG2Q9H2A3 272 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 EIF2B3Q9NR50 452 aaKnown RBP19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 PCDHGC4Q9Y5F7 938 aa19.12■□□□□ 0.65
TNFRSF1A-213ENST00000540022 GOLGA6CA6NDK9 693 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 GOLGA6BA6NDN3 693 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 ERI2A8K979 691 aaKnown RBP19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 CTIFO43310 598 aaKnown RBP19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 ADAM23O75077 832 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 USP12O75317 370 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 PIGNO95427 931 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 KLF8O95600 359 aaPredicted RBP19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 GOLGA6DP0CG33 693 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 GRIA1P42261 906 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 MAPK8P45983 427 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 LMAN1P49257 510 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 PTPN5P54829 565 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 TRAF2Q12933 501 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 MORF4L2Q15014 288 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 ELF2Q15723 593 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 SLC14A2Q15849 920 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 KDELC2Q7Z4H8 507 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 HOOK3Q86VS8 718 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 STK40Q8N2I9 435 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 TXNDC5Q8NBS9 432 aaKnown RBP19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 FBXO25Q8TCJ0 367 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 ERLEC1Q96DZ1 483 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 GABRG3Q99928 467 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 HEPHQ9BQS7 1158 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 ZDHHC6Q9H6R6 413 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 LRRC40Q9H9A6 602 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 PRSS16Q9NQE7 514 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 ZDHHC18Q9NUE0 388 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 GOLGA6AQ9NYA3 693 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 SUN2Q9UH99 717 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 SHOC2Q9UQ13 582 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 MRPS17Q9Y2R5 130 aaKnown RBP19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 WASF2Q9Y6W5 498 aa19.11■□□□□ 0.65
TNFRSF1A-213ENST00000540022 GOLGA8MH3BSY2 632 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 PSMD3O43242 534 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 GALR2O43603 387 aaPredicted RBP19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 SUN1O94901 812 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 AGTP01019 485 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 CTSLP07711 333 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 ECHS1P30084 290 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 ADRA1AP35348 466 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 Q6ZS52 159 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 CAMK1DQ8IU85 385 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 PJA1Q8NG27 643 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 RPLP0P6Q8NHW5 317 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 APOL2Q9BQE5 337 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 FICDQ9BVA6 458 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 TDRD1Q9BXT4 1180 aaKnown RBP19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 CPEB1Q9BZB8 566 aaKnown RBP19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 RAI2Q9Y5P3 530 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 USP34Q70CQ2 3546 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 DCNP07585 359 aaKnown RBP19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 VSNL1P62760 191 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 CDK16Q00536 496 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 RAD51Q06609 339 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 BCL2L1Q07817 233 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 CUL1Q13616 776 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 HLTFQ14527 1009 aaKnown RBP eCLIP19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 PKN3Q6P5Z2 889 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 ZNF534Q76KX8 674 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 TRMT11Q7Z4G4 463 aaKnown RBP19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 GRIN3AQ8TCU5 1115 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 RUBCNQ92622 972 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 PWWP2AQ96N64 755 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 TUBGCP5Q96RT8 1024 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 TRIB3Q96RU7 358 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 FAM129BQ96TA1 746 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 PARD6BQ9BYG5 372 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 LMAN1LQ9HAT1 526 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 POLR3BQ9NW08 1133 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms