RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 FCRL3Q96P31 734 aaPredicted RBP17.07■□□□□ 0.32
COPS3-212ENST00000539941 TCAF1Q9Y4C2 921 aa17.07■□□□□ 0.32
COPS3-212ENST00000539941 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.06■□□□□ 0.32
COPS3-212ENST00000539941 TMEM120BA0PK00 339 aa17.06■□□□□ 0.32
COPS3-212ENST00000539941 SLC9A3R1O14745 358 aaPredicted RBP17.06■□□□□ 0.32
COPS3-212ENST00000539941 PRPF4O43172 522 aaKnown RBP eCLIP17.06■□□□□ 0.32
COPS3-212ENST00000539941 PIAS1O75925 651 aa17.06■□□□□ 0.32
COPS3-212ENST00000539941 SNRPAP09012 282 aaKnown RBP17.06■□□□□ 0.32
COPS3-212ENST00000539941 CHN1P15882 459 aa17.06■□□□□ 0.32
COPS3-212ENST00000539941 CEBPBP17676 345 aa17.06■□□□□ 0.32
COPS3-212ENST00000539941 ADRA1DP25100 572 aa17.06■□□□□ 0.32
COPS3-212ENST00000539941 GBP2P32456 591 aaPredicted RBP17.06■□□□□ 0.32
COPS3-212ENST00000539941 SERPINH1P50454 418 aaKnown RBP17.06■□□□□ 0.32
COPS3-212ENST00000539941 PLK1P53350 603 aa17.06■□□□□ 0.32
COPS3-212ENST00000539941 GUCY1A3Q02108 690 aa17.06■□□□□ 0.32
COPS3-212ENST00000539941 CYTH1Q15438 398 aa17.06■□□□□ 0.32
COPS3-212ENST00000539941 SLC1A5Q15758 541 aa17.06■□□□□ 0.32
COPS3-212ENST00000539941 PCSK7Q16549 785 aa17.06■□□□□ 0.32
COPS3-212ENST00000539941 RETSATQ6NUM9 610 aa17.06■□□□□ 0.32
COPS3-212ENST00000539941 WFDC5Q8TCV5 224 aa17.06■□□□□ 0.32
COPS3-212ENST00000539941 ZNF473Q8WTR7 871 aaKnown RBP17.06■□□□□ 0.32
COPS3-212ENST00000539941 PPANQ9NQ55 473 aaKnown RBP17.06■□□□□ 0.32
COPS3-212ENST00000539941 CHRAC1Q9NRG0 131 aa17.06■□□□□ 0.32
COPS3-212ENST00000539941 INTS9Q9NV88 658 aaKnown RBP17.06■□□□□ 0.32
COPS3-212ENST00000539941 ARIH1Q9Y4X5 557 aaPredicted RBP17.06■□□□□ 0.32
COPS3-212ENST00000539941 HEATR9A2RTY3 570 aa17.05■□□□□ 0.32
COPS3-212ENST00000539941 INSIG1O15503 277 aa17.05■□□□□ 0.32
COPS3-212ENST00000539941 TMCC1O94876 653 aa17.05■□□□□ 0.32
COPS3-212ENST00000539941 PRAMEF12O95522 483 aa17.05■□□□□ 0.32
COPS3-212ENST00000539941 FAM107AO95990 144 aa17.05■□□□□ 0.32
COPS3-212ENST00000539941 PENKP01210 267 aaPredicted RBP17.05■□□□□ 0.32
COPS3-212ENST00000539941 FGF1P05230 155 aa17.05■□□□□ 0.32
COPS3-212ENST00000539941 LSP1P33241 339 aa17.05■□□□□ 0.32
COPS3-212ENST00000539941 CDK18Q07002 472 aa17.05■□□□□ 0.32
COPS3-212ENST00000539941 NSUN2Q08J23 767 aaKnown RBP eCLIP17.05■□□□□ 0.32
COPS3-212ENST00000539941 DNAJC3Q13217 504 aa17.05■□□□□ 0.32
COPS3-212ENST00000539941 BIRC2Q13490 618 aa17.05■□□□□ 0.32
COPS3-212ENST00000539941 LAMB3Q13751 1172 aa17.05■□□□□ 0.32
COPS3-212ENST00000539941 RNF187Q5TA31 235 aaPredicted RBP17.05■□□□□ 0.32
COPS3-212ENST00000539941 TPGS1Q6ZTW0 290 aa17.05■□□□□ 0.32
COPS3-212ENST00000539941 RASSF3Q86WH2 238 aa17.05■□□□□ 0.32
COPS3-212ENST00000539941 MRPL38Q96DV4 380 aaKnown RBP17.05■□□□□ 0.32
COPS3-212ENST00000539941 IFT43Q96FT9 208 aa17.05■□□□□ 0.32
COPS3-212ENST00000539941 NUDCD1Q96RS6 583 aa17.05■□□□□ 0.32
COPS3-212ENST00000539941 KCNK9Q9NPC2 374 aa17.05■□□□□ 0.32
COPS3-212ENST00000539941 ZFATQ9P243 1243 aa17.05■□□□□ 0.32
COPS3-212ENST00000539941 VPS51Q9UID3 782 aa17.05■□□□□ 0.32
COPS3-212ENST00000539941 NUP210Q8TEM1 1887 aaPredicted RBP17.05■□□□□ 0.32
COPS3-212ENST00000539941 FAM47DPA6NHR8 397 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 SNAP91O60641 907 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 CD160O95971 181 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 MT-ND3P03897 115 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 ATXN1LP0C7T5 689 aaKnown RBP17.04■□□□□ 0.32
COPS3-212ENST00000539941 FOSL2P15408 326 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 CREB1P16220 341 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 PAMP19021 973 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 LMAN2Q12907 356 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 IHHQ14623 411 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 POU6F1Q14863 301 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 RBBP5Q15291 538 aaKnown RBP17.04■□□□□ 0.32
COPS3-212ENST00000539941 PDPK2PQ6A1A2 396 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 CES3Q6UWW8 571 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 NLRP9Q7RTR0 991 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 ARID3BQ8IVW6 561 aaPredicted RBP17.04■□□□□ 0.32
COPS3-212ENST00000539941 CELF5Q8N6W0 485 aaKnown RBP17.04■□□□□ 0.32
COPS3-212ENST00000539941 RIN3Q8TB24 985 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 MDM1Q8TC05 714 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 MFSD3Q96ES6 412 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 CPNE1Q99829 537 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 SCUBE2Q9NQ36 999 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 NSMCE4AQ9NXX6 385 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 NKIRAS1Q9NYS0 192 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 MYO9BQ13459 2157 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 FOXO6A8MYZ6 492 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 PAPSS2O95340 614 aaPredicted RBP17.04■□□□□ 0.32
COPS3-212ENST00000539941 NDST3O95803 873 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 ALADP13716 330 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 PAX7P23759 505 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 NMBRP28336 390 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 CHRNA4P43681 627 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 PLEKHG6Q3KR16 790 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 LACTB2Q53H82 288 aaPredicted RBP17.04■□□□□ 0.32
COPS3-212ENST00000539941 SIRPB2Q5JXA9 342 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 CYB5D1Q6P9G0 228 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 C6orf89Q6UWU4 347 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 UNC5BQ8IZJ1 945 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 SLC25A41Q8N5S1 370 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 MAFAQ8NHW3 353 aaPredicted RBP17.04■□□□□ 0.32
COPS3-212ENST00000539941 IRF7Q92985 503 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 BHMTQ93088 406 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 LMLNQ96KR4 655 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 ZSWIM3Q96MP5 696 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 NOD2Q9HC29 1040 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 MARK1Q9P0L2 795 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 TXNDC16Q9P2K2 825 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 ACTL7AQ9Y615 435 aa17.04■□□□□ 0.32
COPS3-212ENST00000539941 A0A1W2PPM1 405 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 EPOPA6NHQ4 379 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 TRIM49D1C9J1S8 452 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 LIN7AO14910 233 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms