RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 PDE1CQ14123 709 aaPredicted RBP17.32■□□□□ 0.36
LTBR-207ENST00000539925 CNGA3Q16281 694 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 TAF1BQ53T94 588 aaPredicted RBP17.32■□□□□ 0.36
LTBR-207ENST00000539925 PLPP4Q5VZY2 271 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 NEPROQ6NW34 567 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 SRLQ86TD4 932 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 ZC3HC1Q86WB0 502 aaKnown RBP17.32■□□□□ 0.36
LTBR-207ENST00000539925 CARNMT1Q8N4J0 409 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 TDRD5Q8NAT2 981 aaKnown RBP17.32■□□□□ 0.36
LTBR-207ENST00000539925 C2CD4AQ8NCU7 369 aaPredicted RBP17.32■□□□□ 0.36
LTBR-207ENST00000539925 AGAP2Q99490 1192 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 CORO1BQ9BR76 489 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 ADGRE3Q9BY15 652 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 MCOLN1Q9GZU1 580 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 ACTR5Q9H9F9 607 aaPredicted RBP17.32■□□□□ 0.36
LTBR-207ENST00000539925 SIRPGQ9P1W8 387 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 CFAP97Q9P2B7 532 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 TLK1Q9UKI8 766 aa17.32■□□□□ 0.36
LTBR-207ENST00000539925 RRP15Q9Y3B9 282 aaKnown RBP17.32■□□□□ 0.36
LTBR-207ENST00000539925 PLXNA4Q9HCM2 1894 aa17.31■□□□□ 0.36
LTBR-207ENST00000539925 LINC01553A4QN01 128 aa17.31■□□□□ 0.36
LTBR-207ENST00000539925 CCT8L1PA6NM43 557 aa17.31■□□□□ 0.36
LTBR-207ENST00000539925 CRTAMO95727 393 aa17.31■□□□□ 0.36
LTBR-207ENST00000539925 MYL4P12829 197 aa17.31■□□□□ 0.36
LTBR-207ENST00000539925 CRABP2P29373 138 aa17.31■□□□□ 0.36
LTBR-207ENST00000539925 ACVR1Q04771 509 aa17.31■□□□□ 0.36
LTBR-207ENST00000539925 MSLNQ13421 630 aaPredicted RBP17.31■□□□□ 0.36
LTBR-207ENST00000539925 NUDCD3Q8IVD9 361 aa17.31■□□□□ 0.36
LTBR-207ENST00000539925 MICAL1Q8TDZ2 1067 aa17.31■□□□□ 0.36
LTBR-207ENST00000539925 ZNF778Q96MU6 729 aa17.31■□□□□ 0.36
LTBR-207ENST00000539925 FEM1AQ9BSK4 669 aa17.31■□□□□ 0.36
LTBR-207ENST00000539925 TSSK1BQ9BXA7 367 aa17.31■□□□□ 0.36
LTBR-207ENST00000539925 MFSD1Q9H3U5 465 aa17.31■□□□□ 0.36
LTBR-207ENST00000539925 TASP1Q9H6P5 420 aa17.31■□□□□ 0.36
LTBR-207ENST00000539925 ALG13Q9NP73 1137 aaKnown RBP17.31■□□□□ 0.36
LTBR-207ENST00000539925 KIAA1522Q9P206 1035 aaPredicted RBP17.31■□□□□ 0.36
LTBR-207ENST00000539925 VPS28Q9UK41 221 aa17.31■□□□□ 0.36
LTBR-207ENST00000539925 CORO1CQ9ULV4 474 aaPredicted RBP17.31■□□□□ 0.36
LTBR-207ENST00000539925 A0A1W2PRU2 124 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 ZMPSTE24O75844 475 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 BPGMP07738 259 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 AVPR1AP37288 418 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 CD151P48509 253 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 SGSHP51688 502 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 KPNA2P52292 529 aaKnown RBP17.3■□□□□ 0.36
LTBR-207ENST00000539925 PRAMEP78395 509 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 CYTH1Q15438 398 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 CDHR3Q6ZTQ4 885 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 FAM47EQ6ZV65 393 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 KDELC2Q7Z4H8 507 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 MFN1Q8IWA4 741 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 HS6ST3Q8IZP7 471 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 KIAA1958Q8N8K9 716 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 ARMC2Q8NEN0 867 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 OR52K2Q8NGK3 314 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 DDI1Q8WTU0 396 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 STYXQ8WUJ0 223 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 WBP2Q969T9 261 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 E2F7Q96AV8 911 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 C7orf26Q96N11 449 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 ZDHHC7Q9NXF8 308 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 FBXO5Q9UKT4 447 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 OR51B4Q9Y5P0 310 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 USH1CQ9Y6N9 552 aa17.3■□□□□ 0.36
LTBR-207ENST00000539925 MUSKO15146 869 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 PLIN3O60664 434 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 ARNTP27540 789 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 CLCN5P51795 746 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 CORO7P57737 925 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 AP1S1P61966 158 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 POU4F1Q01851 419 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 LACTB2Q53H82 288 aaPredicted RBP17.29■□□□□ 0.36
LTBR-207ENST00000539925 RNF187Q5TA31 235 aaPredicted RBP17.29■□□□□ 0.36
LTBR-207ENST00000539925 TRPM8Q7Z2W7 1104 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 CCDC63Q8NA47 563 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 FIBINQ8TAL6 211 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 RDH11Q8TC12 318 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 TSPAN17Q96FV3 270 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 TRIB3Q96RU7 358 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 TRIM55Q9BYV6 548 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.29■□□□□ 0.365e-6■□□□□ 8.2
LTBR-207ENST00000539925 IL1RAPL1Q9NZN1 696 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 HACD3Q9P035 362 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 SLC17A6Q9P2U8 582 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 MTO1Q9Y2Z2 717 aaKnown RBP17.29■□□□□ 0.36
LTBR-207ENST00000539925 A0A096LPK6 155 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 WDR91A4D1P6 747 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 HIDE1A8MVS5 230 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 LEFTY2O00292 366 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 ZNF197O14709 1029 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 CCL16O15467 120 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 H2AFYO75367 372 aaKnown RBP17.29■□□□□ 0.36
LTBR-207ENST00000539925 DCTN3O75935 186 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 TMCC1O94876 653 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 TCF3P15923 654 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 GRK2P25098 689 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 CSNK1DP48730 415 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 SCNN1BP51168 640 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 PLK1P53350 603 aa17.29■□□□□ 0.36
LTBR-207ENST00000539925 PRKAA2P54646 552 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms