RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 VIPAS39Q9H9C1 493 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 VPS37BQ9H9H4 285 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 SAMD15Q9P1V8 674 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 ZC3H7BQ9UGR2 993 aaKnown RBP16.33■□□□□ 0.2
TRAF3-204ENST00000539721 PLA2G4CQ9UP65 541 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 PLAAQ9Y263 795 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 PCDHGC4Q9Y5F7 938 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 RAI2Q9Y5P3 530 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 EYSQ5T1H1 3165 aa16.33■□□□□ 0.2
TRAF3-204ENST00000539721 MUC22E2RYF6 1773 aaPredicted RBP16.33■□□□□ 0.2
TRAF3-204ENST00000539721 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.32■□□□□ 0.2
TRAF3-204ENST00000539721 LOC285095A0A1B0GVY8 99 aa16.32■□□□□ 0.2
TRAF3-204ENST00000539721 TTC34A8MYJ7 566 aa16.32■□□□□ 0.2
TRAF3-204ENST00000539721 KAT7O95251 611 aa16.32■□□□□ 0.2
TRAF3-204ENST00000539721 CA4P22748 312 aa16.32■□□□□ 0.2
TRAF3-204ENST00000539721 GRIA2P42262 883 aa16.32■□□□□ 0.2
TRAF3-204ENST00000539721 VASPP50552 380 aaPredicted RBP16.32■□□□□ 0.2
TRAF3-204ENST00000539721 CARD16Q5EG05 197 aa16.32■□□□□ 0.2
TRAF3-204ENST00000539721 CERCAMQ5T4B2 595 aa16.32■□□□□ 0.2
TRAF3-204ENST00000539721 NUDT18Q6ZVK8 323 aa16.32■□□□□ 0.2
TRAF3-204ENST00000539721 Q6ZVU0 165 aa16.32■□□□□ 0.2
TRAF3-204ENST00000539721 UCMAQ8WVF2 138 aa16.32■□□□□ 0.2
TRAF3-204ENST00000539721 IL22Q9GZX6 179 aa16.32■□□□□ 0.2
TRAF3-204ENST00000539721 ARNT2Q9HBZ2 717 aa16.32■□□□□ 0.2
TRAF3-204ENST00000539721 LRRC4CQ9HCJ2 640 aa16.32■□□□□ 0.2
TRAF3-204ENST00000539721 CHKBQ9Y259 395 aa16.32■□□□□ 0.2
TRAF3-204ENST00000539721 NDST3O95803 873 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 EPOP01588 193 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 ASGR2P07307 311 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 ATXN1LP0C7T5 689 aaKnown RBP16.31■□□□□ 0.2
TRAF3-204ENST00000539721 IL9P15248 144 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 HLA-DPA1P20036 260 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 RECQLP46063 649 aaPredicted RBP16.31■□□□□ 0.2
TRAF3-204ENST00000539721 FAM193AP78312 1265 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 BCL2L1Q07817 233 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 TRAF2Q12933 501 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 GALNT3Q14435 633 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 FNDC3BQ53EP0 1204 aaKnown RBP16.31■□□□□ 0.2
TRAF3-204ENST00000539721 SIRPB2Q5JXA9 342 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 ALS2CLQ60I27 953 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 SFTPA1Q8IWL2 248 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 PDCD6IPQ8WUM4 868 aaKnown RBP16.31■□□□□ 0.2
TRAF3-204ENST00000539721 MYO19Q96H55 970 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 ZIM3Q96PE6 472 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 TRIB3Q96RU7 358 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 RUFY1Q96T51 708 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 P2RY13Q9BPV8 354 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 ACBD3Q9H3P7 528 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 TRPV5Q9NQA5 729 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 ARIH1Q9Y4X5 557 aaPredicted RBP16.31■□□□□ 0.2
TRAF3-204ENST00000539721 FGF1P05230 155 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 TSHRP16473 764 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 SSTR1P30872 391 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 PHBP35232 272 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 CCNHP51946 323 aaPredicted RBP16.31■□□□□ 0.2
TRAF3-204ENST00000539721 GPX6P59796 221 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 TFF2Q03403 129 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 MYLK3Q32MK0 819 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 CCNJLQ8IV13 435 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 IQCKQ8N0W5 287 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 FRS2Q8WU20 508 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 DNASE1L2Q92874 299 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 NAT9Q9BTE0 207 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 ATP13A3Q9H7F0 1226 aa16.31■□□□□ 0.2
TRAF3-204ENST00000539721 SPECC1L-ADORA2AF8WAN1 911 aa16.3■□□□□ 0.2
TRAF3-204ENST00000539721 PIGNO95427 931 aa16.3■□□□□ 0.2
TRAF3-204ENST00000539721 ABHD2P08910 425 aa16.3■□□□□ 0.2
TRAF3-204ENST00000539721 NUDT17P0C025 328 aa16.3■□□□□ 0.2
TRAF3-204ENST00000539721 PGAM1P18669 254 aa16.3■□□□□ 0.2
TRAF3-204ENST00000539721 GKP32189 559 aa16.3■□□□□ 0.2
TRAF3-204ENST00000539721 GALK1P51570 392 aa16.3■□□□□ 0.2
TRAF3-204ENST00000539721 RAD51Q06609 339 aa16.3■□□□□ 0.2
TRAF3-204ENST00000539721 IFFO1Q0D2I5 559 aa16.3■□□□□ 0.2
TRAF3-204ENST00000539721 POU6F1Q14863 301 aa16.3■□□□□ 0.2
TRAF3-204ENST00000539721 DPY19L3Q6ZPD9 716 aa16.3■□□□□ 0.2
TRAF3-204ENST00000539721 C3orf62Q6ZUJ4 267 aa16.3■□□□□ 0.2
TRAF3-204ENST00000539721 CAMK1DQ8IU85 385 aa16.3■□□□□ 0.2
TRAF3-204ENST00000539721 SUGP1Q8IWZ8 645 aaKnown RBP16.3■□□□□ 0.2
TRAF3-204ENST00000539721 PAF1Q8N7H5 531 aa16.3■□□□□ 0.2
TRAF3-204ENST00000539721 KDM1BQ8NB78 822 aa16.3■□□□□ 0.2
TRAF3-204ENST00000539721 PPHLN1Q8NEY8 458 aaKnown RBP16.3■□□□□ 0.2
TRAF3-204ENST00000539721 LPCAT1Q8NF37 534 aa16.3■□□□□ 0.2
TRAF3-204ENST00000539721 OR2W6PQ8NHA6 318 aa16.3■□□□□ 0.2
TRAF3-204ENST00000539721 MAFAQ8NHW3 353 aaPredicted RBP16.3■□□□□ 0.2
TRAF3-204ENST00000539721 ZBTB9Q96C00 473 aa16.3■□□□□ 0.2
TRAF3-204ENST00000539721 RMDN1Q96DB5 314 aa16.3■□□□□ 0.2
TRAF3-204ENST00000539721 ZDHHC6Q9H6R6 413 aa16.3■□□□□ 0.2
TRAF3-204ENST00000539721 A0A087WUV0 522 aaPredicted RBP16.29■□□□□ 0.2
TRAF3-204ENST00000539721 SPAG6O75602 509 aa16.29■□□□□ 0.2
TRAF3-204ENST00000539721 POP4O95707 220 aaKnown RBP16.29■□□□□ 0.2
TRAF3-204ENST00000539721 SERPINA4P29622 427 aa16.29■□□□□ 0.2
TRAF3-204ENST00000539721 CTHP32929 405 aa16.29■□□□□ 0.2
TRAF3-204ENST00000539721 ZNF234Q14588 700 aa16.29■□□□□ 0.2
TRAF3-204ENST00000539721 PCID2Q5JVF3 399 aa16.29■□□□□ 0.2
TRAF3-204ENST00000539721 ARMC12Q5T9G4 340 aa16.29■□□□□ 0.2
TRAF3-204ENST00000539721 LRIG3Q6UXM1 1119 aa16.29■□□□□ 0.2
TRAF3-204ENST00000539721 UNC5AQ6ZN44 842 aa16.29■□□□□ 0.2
TRAF3-204ENST00000539721 PLPP6Q8IY26 295 aa16.29■□□□□ 0.2
TRAF3-204ENST00000539721 ZNF366Q8N895 744 aa16.29■□□□□ 0.2
TRAF3-204ENST00000539721 OR2A12Q8NGT7 310 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms