RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 ZNF460Q14592 562 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 NRF1Q16656 503 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 DGKDQ16760 1214 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 PM20D1Q6GTS8 502 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 DENND5AQ6IQ26 1287 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 PAOXQ6QHF9 649 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 POTEHQ6S545 545 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 HACD2Q6Y1H2 254 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 ERI1Q8IV48 349 aaKnown RBP9.76□□□□□ -0.85
CDH13-204ENST00000539548 NUP93Q8N1F7 819 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 AFAP1L2Q8N4X5 818 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 TRIML2Q8N7C3 387 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 C2CD4AQ8NCU7 369 aaPredicted RBP9.76□□□□□ -0.85
CDH13-204ENST00000539548 TRPC4APQ8TEL6 797 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 CCDC126Q96EE4 140 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 FCRL5Q96RD9 977 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 CCT7Q99832 543 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 FAM49AQ9H0Q0 323 aaPredicted RBP9.76□□□□□ -0.85
CDH13-204ENST00000539548 PCDHAC1Q9H158 963 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 OSBPL2Q9H1P3 480 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 POMKQ9H5K3 350 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 GOLGA2P5Q9HBQ8 144 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 EML4Q9HC35 981 aaKnown RBP9.76□□□□□ -0.85
CDH13-204ENST00000539548 CNGB3Q9NQW8 809 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 DDIT4Q9NX09 232 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 GALNT8Q9NY28 637 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 GTSE1Q9NYZ3 720 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 SQORQ9Y6N5 450 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 FAM155AB1AL88 458 aaPredicted RBP9.75□□□□□ -0.85
CDH13-204ENST00000539548 ANXA9O76027 345 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 PYGLP06737 847 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 SNRPB2P08579 225 aaKnown RBP9.75□□□□□ -0.85
CDH13-204ENST00000539548 NCAM1P13591 858 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 HNRNPLP14866 589 aaKnown RBP eCLIP9.75□□□□□ -0.85
CDH13-204ENST00000539548 ARNTP27540 789 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 CDK9P50750 372 aaKnown RBP9.75□□□□□ -0.85
CDH13-204ENST00000539548 TUBA4AP68366 448 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 PFKPQ01813 784 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 FASTKQ14296 549 aaKnown RBP9.75□□□□□ -0.85
CDH13-204ENST00000539548 AGKQ53H12 422 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 RAB41Q5JT25 222 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 KIAA0319Q5VV43 1072 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 WSCD1Q658N2 575 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 REP15Q6BDI9 236 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 FAM45BPQ6NSW5 357 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 ESRP1Q6NXG1 681 aaKnown RBP9.75□□□□□ -0.85
CDH13-204ENST00000539548 DCLRE1AQ6PJP8 1040 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 HERC6Q8IVU3 1022 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 SPATA6LQ8N4H0 392 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 PPHLN1Q8NEY8 458 aaKnown RBP9.75□□□□□ -0.85
CDH13-204ENST00000539548 FAM45AQ8TCE6 357 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 HM13Q8TCT9 377 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 GFM2Q969S9 779 aaKnown RBP9.75□□□□□ -0.85
CDH13-204ENST00000539548 ELMO2Q96JJ3 720 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 OSMRQ99650 979 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 SLC29A1Q99808 456 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 SMOQ99835 787 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 EFHD1Q9BUP0 239 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 KATNBL1Q9H079 304 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 TRPV6Q9H1D0 765 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 SEMA6AQ9H2E6 1030 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 RNF39Q9H2S5 420 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 WDCPQ9H6R7 721 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 TRPC7Q9HCX4 862 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 IGSF5Q9NSI5 407 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 PNPLA3Q9NST1 481 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 OLAHQ9NV23 265 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 IRAK4Q9NWZ3 460 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 TMEM181Q9P2C4 612 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 RSL24D1Q9UHA3 163 aaKnown RBP9.75□□□□□ -0.85
CDH13-204ENST00000539548 MYRFQ9Y2G1 1151 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.75□□□□□ -0.85
CDH13-204ENST00000539548 MYLKQ15746 1914 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 A0A1B0GTW7 788 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 PRORSD1PA6NEY8 169 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 GPC4O75487 556 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 LRIG2O94898 1065 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 CCDC166P0CW27 439 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 LRPAP1P30533 357 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 ADRA1AP35348 466 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 SLC1A2P43004 574 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 CD151P48509 253 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 GALNT1Q10472 559 aaPredicted RBP9.75□□□□□ -0.85
CDH13-204ENST00000539548 DCTN2Q13561 401 aaKnown RBP9.75□□□□□ -0.85
CDH13-204ENST00000539548 POU6F1Q14863 301 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 MYBPC3Q14896 1274 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 CYTH1Q15438 398 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 SAMD4BQ5PRF9 694 aaKnown RBP9.75□□□□□ -0.85
CDH13-204ENST00000539548 UBXN11Q5T124 520 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 PPP4R4Q6NUP7 873 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 C8orf82Q6P1X6 216 aaPredicted RBP9.75□□□□□ -0.85
CDH13-204ENST00000539548 FASTKD5Q7L8L6 764 aaKnown RBP9.75□□□□□ -0.85
CDH13-204ENST00000539548 ANKFN1Q8N957 763 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 SPATA22Q8NHS9 363 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 DIS3LQ8TF46 1054 aaKnown RBP9.75□□□□□ -0.85
CDH13-204ENST00000539548 GAB3Q8WWW8 586 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 PBXIP1Q96AQ6 731 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 SGF29Q96ES7 293 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 TMEM79Q9BSE2 394 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 SLC25A23Q9BV35 468 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms