RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 IPMKQ8NFU5 416 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 SLC44A1Q8WWI5 657 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 PRR11Q96HE9 360 aaPredicted RBP17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 KCNK13Q9HB14 408 aa17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 FBXO6Q9NRD1 293 aaPredicted RBP17.29■□□□□ 0.36
PCDHB17P-201ENST00000539533 TTC24A2A3L6 582 aaPredicted RBP17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 CA3P07451 260 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 DHRS4L1P0CG22 281 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 CCR2P41597 374 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 IL10RBQ08334 325 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 ITKQ08881 620 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 ACSBG2Q5FVE4 666 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 KDELC2Q7Z4H8 507 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 BFARQ9NZS9 450 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 RWDD3Q9Y3V2 267 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 ACTL7AQ9Y615 435 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 C5orf67F2Z3F1 127 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 ATP9BO43861 1147 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 UGT1A9O60656 530 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 PMPCBO75439 489 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 CLDN11O75508 207 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 KRT36O76013 467 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 ANXA9O76027 345 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 TGDSO95455 350 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 GSTA2P09210 222 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 PGAM1P18669 254 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 GNA12Q03113 381 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 SMAD1Q15797 465 aaKnown RBP17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 STEAP4Q687X5 459 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 NAPEPLDQ6IQ20 393 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 PGBD5Q8N414 524 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 FATE1Q969F0 183 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 MCUR1Q96AQ8 359 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 FAM136AQ96C01 138 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 UGT1A7Q9HAW7 530 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 UGT1A10Q9HAW8 530 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 UGT1A8Q9HAW9 530 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 MAN1C1Q9NR34 630 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 ASAH2Q9NR71 780 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 MOCS1Q9NZB8 636 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 STOML2Q9UJZ1 356 aa17.28■□□□□ 0.36
PCDHB17P-201ENST00000539533 PRAMEF11O60813 436 aa17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 DLDP09622 509 aaKnown RBP17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 ETV4P43268 484 aa17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 NEK3P51956 506 aa17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 IHHQ14623 411 aa17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 KRT72Q14CN4 511 aa17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 IL31Q6EBC2 164 aa17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 RINLQ6ZS11 566 aa17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 APLFQ8IW19 511 aaPredicted RBP17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 GALNT15Q8N3T1 639 aa17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 TEX26Q8N6G2 289 aa17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 APOPT1Q96IL0 206 aa17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 SERAC1Q96JX3 654 aa17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 FCRL3Q96P31 734 aaPredicted RBP17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 FAM111AQ96PZ2 611 aa17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 SPON2Q9BUD6 331 aa17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 SLC46A2Q9BY10 475 aa17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 IL1RAPL1Q9NZN1 696 aa17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 IKBKGQ9Y6K9 419 aa17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 RPS6KL1Q9Y6S9 549 aa17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 DENND4CQ5VZ89 1909 aa17.27■□□□□ 0.36
PCDHB17P-201ENST00000539533 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 IQANK1A0A1B0GTG1 560 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 PER2O15055 1255 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 INHBAP08476 426 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 EPCAMP16422 314 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 BGNP21810 368 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 GLDCP23378 1020 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 HOXD9P28356 352 aaPredicted RBP17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 UBE3AQ05086 875 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 NIPAL4Q0D2K0 466 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 ZNF177Q13360 481 aaPredicted RBP17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 NRG4Q8WWG1 115 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 TTC17Q96AE7 1141 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 TBL1YQ9BQ87 522 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 FICDQ9BVA6 458 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 SMG9Q9H0W8 520 aaKnown RBP17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 SLC25A51Q9H1U9 297 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 MAGEH1Q9H213 219 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 MTCL1Q9Y4B5 1905 aaKnown RBP17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 PDE4DIPQ5VU43 2346 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 A0A1B0GVM2 712 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 TCAF2A6NFQ2 919 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 FAM159BA6NKW6 160 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 PSMD3O43242 534 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 GJB3O75712 270 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 SP100P23497 879 aaPredicted RBP17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 GEMP55040 296 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 OCRLQ01968 901 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 DSC2Q02487 901 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 CDH17Q12864 832 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 SHHQ15465 462 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 PCSK7Q16549 785 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 IRGCQ6NXR0 463 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 Q6ZNB5 142 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 LINC00523Q86TU6 105 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 SLC26A11Q86WA9 606 aa17.26■□□□□ 0.35
PCDHB17P-201ENST00000539533 CCNJLQ8IV13 435 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms