RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 CLDN7O95471 211 aa6.93□□□□□ -1.3
TRAV11-201ENST00000539512 CYP1A2P05177 515 aa6.93□□□□□ -1.3
TRAV11-201ENST00000539512 CBSLP0DN79 551 aa6.93□□□□□ -1.3
TRAV11-201ENST00000539512 CBSP35520 551 aa6.93□□□□□ -1.3
TRAV11-201ENST00000539512 PPP3CCP48454 512 aa6.93□□□□□ -1.3
TRAV11-201ENST00000539512 POLD2P49005 469 aa6.93□□□□□ -1.3
TRAV11-201ENST00000539512 ZNF81P51508 661 aa6.93□□□□□ -1.3
TRAV11-201ENST00000539512 RPS3AP61247 264 aaKnown RBP6.93□□□□□ -1.3
TRAV11-201ENST00000539512 SETQ01105 290 aaPredicted RBP6.93□□□□□ -1.3
TRAV11-201ENST00000539512 PKP1Q13835 747 aa6.93□□□□□ -1.3
TRAV11-201ENST00000539512 SIM2Q14190 667 aaPredicted RBP6.93□□□□□ -1.3
TRAV11-201ENST00000539512 CCNG2Q16589 344 aa6.93□□□□□ -1.3
TRAV11-201ENST00000539512 WASHC2DQ5SRD0 308 aa6.93□□□□□ -1.3
TRAV11-201ENST00000539512 CDC73Q6P1J9 531 aa6.93□□□□□ -1.3
TRAV11-201ENST00000539512 C1orf122Q6ZSJ8 110 aa6.93□□□□□ -1.3
TRAV11-201ENST00000539512 PATL1Q86TB9 770 aaKnown RBP6.93□□□□□ -1.3
TRAV11-201ENST00000539512 TBC1D1Q86TI0 1168 aaPredicted RBP6.93□□□□□ -1.3
TRAV11-201ENST00000539512 ZCCHC9Q8N567 271 aaKnown RBP6.93□□□□□ -1.3
TRAV11-201ENST00000539512 GJC3Q8NFK1 279 aa6.93□□□□□ -1.3
TRAV11-201ENST00000539512 PIP5K1AQ99755 562 aa6.93□□□□□ -1.3
TRAV11-201ENST00000539512 POLDIP3Q9BY77 421 aaKnown RBP6.93□□□□□ -1.3
TRAV11-201ENST00000539512 USP44Q9H0E7 712 aa6.93□□□□□ -1.3
TRAV11-201ENST00000539512 MVB12BQ9H7P6 319 aa6.93□□□□□ -1.3
TRAV11-201ENST00000539512 BPIFA1Q9NP55 256 aa6.93□□□□□ -1.3
TRAV11-201ENST00000539512 SIRT3Q9NTG7 399 aaPredicted RBP6.93□□□□□ -1.3
TRAV11-201ENST00000539512 LIMA1Q9UHB6 759 aaKnown RBP6.93□□□□□ -1.3
TRAV11-201ENST00000539512 SQORQ9Y6N5 450 aa6.93□□□□□ -1.3
TRAV11-201ENST00000539512 TDRD9Q8NDG6 1382 aaKnown RBP6.93□□□□□ -1.3
TRAV11-201ENST00000539512 PGPEP1LA6NFU8 196 aa6.92□□□□□ -1.3
TRAV11-201ENST00000539512 HNRNPCL1O60812 293 aaKnown RBP6.92□□□□□ -1.3
TRAV11-201ENST00000539512 DDX58O95786 925 aaKnown RBP6.92□□□□□ -1.3
TRAV11-201ENST00000539512 SCGB1D1O95968 90 aa6.92□□□□□ -1.3
TRAV11-201ENST00000539512 HEXAP06865 529 aa6.92□□□□□ -1.3
TRAV11-201ENST00000539512 NFKBIAP25963 317 aa6.92□□□□□ -1.3
TRAV11-201ENST00000539512 RXRGP48443 463 aa6.92□□□□□ -1.3
TRAV11-201ENST00000539512 COLEC12Q5KU26 742 aa6.92□□□□□ -1.3
TRAV11-201ENST00000539512 OTUD1Q5VV17 481 aaPredicted RBP6.92□□□□□ -1.3
TRAV11-201ENST00000539512 KLHL24Q6TFL4 600 aa6.92□□□□□ -1.3
TRAV11-201ENST00000539512 Q6ZTK2 550 aa6.92□□□□□ -1.3
TRAV11-201ENST00000539512 PDILTQ8N807 584 aa6.92□□□□□ -1.3
TRAV11-201ENST00000539512 C7orf57Q8NEG2 295 aa6.92□□□□□ -1.3
TRAV11-201ENST00000539512 MCPH1Q8NEM0 835 aa6.92□□□□□ -1.3
TRAV11-201ENST00000539512 ANKRD10Q9NXR5 420 aa6.92□□□□□ -1.3
TRAV11-201ENST00000539512 ADGRF5Q8IZF2 1346 aa6.92□□□□□ -1.3
TRAV11-201ENST00000539512 KDM3AQ9Y4C1 1321 aa6.92□□□□□ -1.3
TRAV11-201ENST00000539512 RPS10-NUDT3A0A1W2PQS6 291 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 CBY3A6NI87 242 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 USP17L23D6RBM5 183 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 MS4A18H0YCH9 400 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 CHL1O00533 1208 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 MOSPD3O75425 235 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 MT-CYBP00156 380 aaPredicted RBP6.91□□□□□ -1.3
TRAV11-201ENST00000539512 TFP02787 698 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 KRT10P13645 584 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 CAPN3P20807 821 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 SCP2P22307 547 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 TTKP33981 857 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 RASSF2P50749 326 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 CLNS1AP54105 237 aaKnown RBP6.91□□□□□ -1.3
TRAV11-201ENST00000539512 MAMLD1Q13495 774 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 RNPS1Q15287 305 aaKnown RBP6.91□□□□□ -1.3
TRAV11-201ENST00000539512 TCTN1Q2MV58 587 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 DPCR1Q3MIW9 517 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 ASPHD1Q5U4P2 390 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 DCAF12L2Q5VW00 463 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 PIP4P1Q86T03 277 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 ZNF575Q86XF7 245 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 TDRPQ86YL5 185 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 NRACQ8N912 160 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 GTF3C6Q969F1 213 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 FAM149B1Q96BN6 582 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 NDRG3Q9UGV2 375 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 AAR2Q9Y312 384 aaKnown RBP6.91□□□□□ -1.3
TRAV11-201ENST00000539512 PAM16Q9Y3D7 125 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 ZNF521Q96K83 1311 aa6.91□□□□□ -1.3
TRAV11-201ENST00000539512 PI4KAP2A4QPH2 592 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 NPIPB15A6NHN6 443 aaPredicted RBP6.9□□□□□ -1.3
TRAV11-201ENST00000539512 HSPB2A8KAH6 182 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 KDM4EB2RXH2 506 aaPredicted RBP6.9□□□□□ -1.3
TRAV11-201ENST00000539512 KLRF2D3W0D1 207 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 SNAP23O00161 211 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 LDLRAD4O15165 306 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 BCAT2O15382 392 aaPredicted RBP6.9□□□□□ -1.3
TRAV11-201ENST00000539512 TIPRLO75663 272 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 RNASEH2AO75792 299 aaKnown RBP6.9□□□□□ -1.3
TRAV11-201ENST00000539512 PSG1P11464 419 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 MYF6P23409 242 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 CDC25AP30304 524 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 ZP1P60852 638 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 DCAF7P61962 342 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 OLR1P78380 273 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 FAM27E3Q08E93 113 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 LPIN1Q14693 890 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 HSPB2Q16082 182 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 PRAMEF19Q5SWL8 479 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 TXNDC8Q6A555 127 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 LRRC8EQ6NSJ5 796 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 MON1BQ7L1V2 547 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 RBFAQ8N0V3 343 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 NGEFQ8N5V2 710 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms