RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 RBM41Q96IZ5 413 aaKnown RBP15.93■□□□□ 0.14
RPAIN-206ENST00000539417 FAM118BQ9BPY3 351 aa15.93■□□□□ 0.14
RPAIN-206ENST00000539417 CPEB1Q9BZB8 566 aaKnown RBP15.93■□□□□ 0.14
RPAIN-206ENST00000539417 OSBPL8Q9BZF1 889 aa15.93■□□□□ 0.14
RPAIN-206ENST00000539417 TSGA10Q9BZW7 698 aa15.93■□□□□ 0.14
RPAIN-206ENST00000539417 DYRK4Q9NR20 520 aa15.93■□□□□ 0.14
RPAIN-206ENST00000539417 FADS3Q9Y5Q0 445 aa15.93■□□□□ 0.14
RPAIN-206ENST00000539417 ADAMTS9Q9P2N4 1935 aa15.93■□□□□ 0.14
RPAIN-206ENST00000539417 LRRC72A6NJI9 287 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 RNGTTO60942 597 aaKnown RBP15.92■□□□□ 0.14
RPAIN-206ENST00000539417 ZNF806P0C7X5 589 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 CCNB1P14635 433 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 MX2P20592 715 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 DSC2Q02487 901 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 NIPAL4Q0D2K0 466 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 AP1B1Q10567 949 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 HNRNPDQ14103 355 aaKnown RBP15.92■□□□□ 0.14
RPAIN-206ENST00000539417 TFDP2Q14188 446 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 FGL2Q14314 439 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 SEL1L3Q68CR1 1132 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 FBXL19Q6PCT2 694 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 PRR23CQ6ZRP0 262 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 BBS12Q6ZW61 710 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 LRRC49Q8IUZ0 686 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 REXO1L1PQ8IX06 675 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 SYCE1Q8N0S2 351 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 PPP1R16AQ96I34 528 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 LRIG1Q96JA1 1093 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 SUV39H2Q9H5I1 410 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 VPS45Q9NRW7 570 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 RBM22Q9NW64 420 aaKnown RBP eCLIP15.92■□□□□ 0.14
RPAIN-206ENST00000539417 PCDHGC4Q9Y5F7 938 aa15.92■□□□□ 0.14
RPAIN-206ENST00000539417 A0A1W2PQU0 124 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 TCRBV7S2A1N4TA0A589 114 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 TRAFD1O14545 582 aaPredicted RBP15.91■□□□□ 0.14
RPAIN-206ENST00000539417 JCHAINP01591 159 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 PTMAP06454 111 aaKnown RBP15.91■□□□□ 0.14
RPAIN-206ENST00000539417 ZFXP17010 805 aaPredicted RBP15.91■□□□□ 0.14
RPAIN-206ENST00000539417 BNC1Q01954 994 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 RAD51Q06609 339 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 SFSWAPQ12872 951 aaKnown RBP15.91■□□□□ 0.14
RPAIN-206ENST00000539417 TRAF2Q12933 501 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 PRKD1Q15139 912 aaPredicted RBP15.91■□□□□ 0.14
RPAIN-206ENST00000539417 PTPRRQ15256 657 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 TRIM61Q5EBN2 209 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 TIGD7Q6NT04 549 aaPredicted RBP15.91■□□□□ 0.14
RPAIN-206ENST00000539417 ZC3H18Q86VM9 953 aaKnown RBP15.91■□□□□ 0.14
RPAIN-206ENST00000539417 ARRDC2Q8TBH0 407 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 FATE1Q969F0 183 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 SMIM14Q96QK8 99 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 NUDCD1Q96RS6 583 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 IL12RB2Q99665 862 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 SEMA3CQ99985 751 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 OSBPL1AQ9BXW6 950 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 PCED1AQ9H1Q7 454 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 CA5BQ9Y2D0 317 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 PCDH15Q96QU1 1955 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 LNP1A1A4G5 178 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 TSPAN11A1L157 253 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 AREL1O15033 823 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 LATO43561 262 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 LRP3O75074 770 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 PRLRP16471 622 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 TGM2P21980 687 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 PTPN7P35236 360 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 RENBPP51606 427 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 COPS2P61201 443 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 PDK1Q15118 436 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 ZNF284Q2VY69 593 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 WDR45BQ5MNZ6 344 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 SYCP2LQ5T4T6 812 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 MEI1Q5TIA1 1274 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 KDM7AQ6ZMT4 941 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 TTC7BQ86TV6 843 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 OR2I1PQ8NGU4 316 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 NSMCE1Q8WV22 266 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 ECHDC3Q96DC8 303 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 SLC6A18Q96N87 628 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 TM9SF3Q9HD45 589 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 FZD3Q9NPG1 666 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 SCUBE2Q9NQ36 999 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 DKK3Q9UBP4 350 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 PYCARDQ9ULZ3 195 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 ATP8A1Q9Y2Q0 1164 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 TTLL3Q9Y4R7 772 aa15.91■□□□□ 0.14
RPAIN-206ENST00000539417 PTPRZ1P23471 2315 aaPredicted RBP15.9■□□□□ 0.14
RPAIN-206ENST00000539417 A0A1W2PPC4 97 aa15.9■□□□□ 0.14
RPAIN-206ENST00000539417 USP27XA6NNY8 438 aa15.9■□□□□ 0.14
RPAIN-206ENST00000539417 MIF4GDA9UHW6 222 aaKnown RBP15.9■□□□□ 0.14
RPAIN-206ENST00000539417 PCDH8O95206 1070 aa15.9■□□□□ 0.14
RPAIN-206ENST00000539417 WNT1P04628 370 aa15.9■□□□□ 0.14
RPAIN-206ENST00000539417 CFIP05156 583 aa15.9■□□□□ 0.14
RPAIN-206ENST00000539417 MMP2P08253 660 aa15.9■□□□□ 0.14
RPAIN-206ENST00000539417 CD27P26842 260 aa15.9■□□□□ 0.14
RPAIN-206ENST00000539417 CCR5P51681 352 aa15.9■□□□□ 0.14
RPAIN-206ENST00000539417 AP1S1P61966 158 aa15.9■□□□□ 0.14
RPAIN-206ENST00000539417 IFI35P80217 286 aaPredicted RBP15.9■□□□□ 0.14
RPAIN-206ENST00000539417 OTUD4Q01804 1114 aaKnown RBP15.9■□□□□ 0.14
RPAIN-206ENST00000539417 BCL2L1Q07817 233 aa15.9■□□□□ 0.14
RPAIN-206ENST00000539417 ITKQ08881 620 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms