RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 PABPC5Q96DU9 382 aaKnown RBP18.08■□□□□ 0.49
GNE-204ENST00000539208 KLHL5Q96PQ7 755 aa18.08■□□□□ 0.49
GNE-204ENST00000539208 STARD7Q9NQZ5 370 aa18.08■□□□□ 0.49
GNE-204ENST00000539208 PCDHB7Q9Y5E2 793 aa18.08■□□□□ 0.49
GNE-204ENST00000539208 LOC285095A0A1B0GVY8 99 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 ARVCFO00192 962 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 SLC22A2O15244 555 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 SLC7A4O43246 635 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 ZBTB14O43829 449 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 NPHS1O60500 1241 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 RAMP2O60895 175 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 LUC7L3O95232 432 aaKnown RBP18.08■□□□□ 0.48
GNE-204ENST00000539208 PIGNO95427 931 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 CPB1P15086 417 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 SERPINB5P36952 375 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 PBX3P40426 434 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 CLCN5P51795 746 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 PGGT1BP53609 377 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 SLC12A2P55011 1212 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 DSC2Q02487 901 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 BTKQ06187 659 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 NOGQ13253 232 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 BTG3Q14201 252 aaPredicted RBP18.08■□□□□ 0.48
GNE-204ENST00000539208 POLD3Q15054 466 aaPredicted RBP18.08■□□□□ 0.48
GNE-204ENST00000539208 SLC14A2Q15849 920 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 MIB1Q86YT6 1006 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 LMNTD2Q8IXW0 634 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 PHTF2Q8N3S3 785 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 POU5F2Q8N7G0 328 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 GPATCH11Q8N954 259 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 ACTRT2Q8TDY3 377 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 CLPTM1LQ96KA5 538 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 CNDP1Q96KN2 507 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 MARCH5Q9NX47 278 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 CENPFP49454 3210 aa18.08■□□□□ 0.48
GNE-204ENST00000539208 SLC12A8A0AV02 714 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 GRID2O43424 1007 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 DCXO43602 365 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 CCNT2O60583 730 aaKnown RBP18.07■□□□□ 0.48
GNE-204ENST00000539208 VNN2O95498 520 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 COX4I1P13073 169 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 ACADSP16219 412 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 CLNS1AP54105 237 aaKnown RBP18.07■□□□□ 0.48
GNE-204ENST00000539208 MAXP61244 160 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 SLC25A3Q00325 362 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 ELAVL2Q12926 359 aaKnown RBP18.07■□□□□ 0.48
GNE-204ENST00000539208 KLF10Q13118 480 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 ZNF460Q14592 562 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 IHHQ14623 411 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 PGM2L1Q6PCE3 622 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 LSMEM2Q8N112 164 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 OR13J1Q8NGT2 312 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 OR52B2Q96RD2 323 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 MAN1C1Q9NR34 630 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 SLC27A5Q9Y2P5 690 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 MIA3Q5JRA6 1907 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 MEI4A8MW99 385 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 H7C4K7 107 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 NVLO15381 856 aaKnown RBP18.07■□□□□ 0.48
GNE-204ENST00000539208 SOAT2O75908 522 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 C5orf22Q49AR2 442 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 CNSTQ6PJW8 725 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 LRRC74BQ6ZQY2 392 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 HEXDCQ8WVB3 486 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 DNAJC9Q8WXX5 260 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 TSPAN17Q96FV3 270 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 ZNF333Q96JL9 665 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 RPRD1AQ96P16 312 aaPredicted RBP18.07■□□□□ 0.48
GNE-204ENST00000539208 RTKNQ9BST9 563 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 CCDC28BQ9BUN5 200 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 MFSD1Q9H3U5 465 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 RETREG1Q9H6L5 497 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 IGSF5Q9NSI5 407 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 ANGPTL2Q9UKU9 493 aa18.07■□□□□ 0.48
GNE-204ENST00000539208 GREB1Q4ZG55 1949 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 E9PBE3 544 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 KLHL41O60662 606 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 NBNO60934 754 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 ATP5F1P24539 256 aaPredicted RBP18.06■□□□□ 0.48
GNE-204ENST00000539208 ADSLP30566 484 aaPredicted RBP18.06■□□□□ 0.48
GNE-204ENST00000539208 SLC11A1P49279 550 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 ARPP19P56211 112 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 FAM83EQ2M2I3 478 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 MGAT5BQ3V5L5 792 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 SIRPB2Q5JXA9 342 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 TMCO4Q5TGY1 634 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 C1orf146Q5VVC0 180 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 FUT10Q6P4F1 479 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 RNF19BQ6ZMZ0 732 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 PIWIL4Q7Z3Z4 852 aaKnown RBP18.06■□□□□ 0.48
GNE-204ENST00000539208 REM2Q8IYK8 340 aaPredicted RBP18.06■□□□□ 0.48
GNE-204ENST00000539208 PGBD5Q8N414 524 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 CPSF7Q8N684 471 aaKnown RBP18.06■□□□□ 0.48
GNE-204ENST00000539208 NRG4Q8WWG1 115 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 PEX13Q92968 403 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 B3GALT6Q96L58 329 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 CRISPLD1Q9H336 500 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 ZDHHC2Q9UIJ5 367 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 ARHGAP26Q9UNA1 814 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 PRAMEF11O60813 436 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms