RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 DNAJC21Q5F1R6 531 aaKnown RBP14.3□□□□□ -0.12
CD4-208ENST00000538827 DGKKQ5KSL6 1271 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 HP1BP3Q5SSJ5 553 aaPredicted RBP14.3□□□□□ -0.12
CD4-208ENST00000538827 ALG1LQ6GMV1 187 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 EMBQ6PCB8 327 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 TXNDC11Q6PKC3 985 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 SERPINA13PQ6UXR4 307 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 CEP128Q6ZU80 1094 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 PDIK1LQ8N165 341 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 SLC25A41Q8N5S1 370 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 DNAAF3Q8N9W5 541 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 OR2AP1Q8NGE2 309 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 OR52K1Q8NGK4 314 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 PDCD6IPQ8WUM4 868 aaKnown RBP14.3□□□□□ -0.12
CD4-208ENST00000538827 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.3□□□□□ -0.124e-7■■■■■ 58.1
CD4-208ENST00000538827 FOXP3Q9BZS1 431 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 ZDHHC6Q9H6R6 413 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 C8orf33Q9H7E9 229 aaPredicted RBP14.3□□□□□ -0.12
CD4-208ENST00000538827 XAB2Q9HCS7 855 aaKnown RBP14.3□□□□□ -0.12
CD4-208ENST00000538827 ZDHHC4Q9NPG8 344 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 VPS45Q9NRW7 570 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 PLA2G4CQ9UP65 541 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 DMDP11532 3685 aa14.3□□□□□ -0.12
CD4-208ENST00000538827 TPRP12270 2363 aaKnown RBP14.29□□□□□ -0.12
CD4-208ENST00000538827 CXorf51AA0A1B0GTR3 108 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 ATP9BO43861 1147 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 KRT37O76014 449 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 CPP00450 1065 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 AGTP01019 485 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 HLA-EP13747 358 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 CA4P22748 312 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 GKP32189 559 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 GALK1P51570 392 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 CCNHP51946 323 aaPredicted RBP14.29□□□□□ -0.12
CD4-208ENST00000538827 CDK16Q00536 496 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 DHX9Q08211 1270 aaKnown RBP14.29□□□□□ -0.12
CD4-208ENST00000538827 TRAF2Q12933 501 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 GALNT3Q14435 633 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 ZNF234Q14588 700 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 PTPRNQ16849 979 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 FNBP1LQ5T0N5 605 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 EGFLAMQ63HQ2 1017 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 KCTD11Q693B1 232 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 NCEH1Q6PIU2 408 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 TPRG1Q6ZUI0 275 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 ZNF534Q76KX8 674 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 LINC00523Q86TU6 105 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 RALGPS2Q86X27 583 aaPredicted RBP14.29□□□□□ -0.12
CD4-208ENST00000538827 ANKMY2Q8IV38 441 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 MCUQ8NE86 351 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 LPCAT1Q8NF37 534 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 CAVIN3Q969G5 261 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 MYO19Q96H55 970 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 MRGPRX2Q96LB1 330 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 FRMD8Q9BZ67 464 aaPredicted RBP14.29□□□□□ -0.12
CD4-208ENST00000538827 MTG2Q9H4K7 406 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 TRPV5Q9NQA5 729 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 HECAQ9UBI9 543 aaPredicted RBP14.29□□□□□ -0.12
CD4-208ENST00000538827 CHMP2BQ9UQN3 213 aa14.29□□□□□ -0.12
CD4-208ENST00000538827 VPS13AQ96RL7 3174 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 TIMM44O43615 452 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 PPFIA2O75334 1257 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 AVILO75366 819 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 SUN1O94901 812 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 CES1P23141 567 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 MGAT1P26572 445 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 WASP42768 502 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 CHRNA4P43681 627 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 MAPK8P45983 427 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 RAD51Q06609 339 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 BCL2L1Q07817 233 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 CDH17Q12864 832 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 SEPT6Q14141 434 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 SLMAPQ14BN4 828 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 FASTKD3Q14CZ7 662 aaKnown RBP14.28□□□□□ -0.12
CD4-208ENST00000538827 CARD16Q5EG05 197 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 DENND2CQ68D51 928 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 CASC4Q6P4E1 433 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 LRRC8BQ6P9F7 803 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 CAPN12Q6ZSI9 719 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 TMC3Q7Z5M5 1100 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 KLHDC8BQ8IXV7 354 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 ZBED8Q8IZ13 594 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 GRIN3AQ8TCU5 1115 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 UBLCP1Q8WVY7 318 aaPredicted RBP14.28□□□□□ -0.12
CD4-208ENST00000538827 ANKRD7Q92527 254 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 ISG20Q96AZ6 181 aaKnown RBP14.28□□□□□ -0.12
CD4-208ENST00000538827 ERLEC1Q96DZ1 483 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 CFAP36Q96G28 342 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 FEM1CQ96JP0 617 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 TDRD1Q9BXT4 1180 aaKnown RBP14.28□□□□□ -0.12
CD4-208ENST00000538827 FBRSL1Q9HCM7 1045 aaKnown RBP14.28□□□□□ -0.12
CD4-208ENST00000538827 ARFGAP3Q9NP61 516 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 CASS4Q9NQ75 786 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 CA14Q9ULX7 337 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 DUSP12Q9UNI6 340 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 CHKBQ9Y259 395 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 PCDHGC4Q9Y5F7 938 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 RAI2Q9Y5P3 530 aa14.28□□□□□ -0.12
CD4-208ENST00000538827 MAD1L1Q9Y6D9 718 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 454.1 ms