RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 NDRG2Q9UN36 371 aaKnown RBP10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 CHKBQ9Y259 395 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 HS3ST2Q9Y278 367 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 MRPS17Q9Y2R5 130 aaKnown RBP10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 ARIH1Q9Y4X5 557 aaPredicted RBP10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 PCDHGC4Q9Y5F7 938 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 PCDHGA4Q9Y5G9 962 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 RAI2Q9Y5P3 530 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 MIA3Q5JRA6 1907 aa10.78□□□□□ -0.68
TNFRSF1A-211ENST00000538363 COL4A3Q01955 1670 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TCRBV7S3A2A0A539 114 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PRRT4C9JH25 899 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 NPC1O15118 1278 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 NARSO43776 548 aaKnown RBP10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 FAM153BP0C7A2 387 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 MLNP12872 115 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TPH1P17752 444 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 MGAT1P26572 445 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 WASP42768 502 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 MAGEA4P43358 317 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CSNK1DP48730 415 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CCNHP51946 323 aaPredicted RBP10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 POLR2LP62875 67 aaKnown RBP10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 FAM193AP78312 1265 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 SKOR1P84550 965 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 MTM1Q13496 603 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ZNF234Q14588 700 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 STARD3Q14849 445 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 FAM153CQ494X1 144 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 C2orf27AQ580R0 203 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 DGKKQ5KSL6 1271 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 NCEH1Q6PIU2 408 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ZDHHC24Q6UX98 284 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ZNF852Q6ZMS4 543 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CAPN12Q6ZSI9 719 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 KIAA0907Q7Z7F0 614 aaPredicted RBP10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 GOLGA6L1Q8N7Z2 621 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ZNF366Q8N895 744 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 GANCQ8TET4 914 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 STAMBPL1Q96FJ0 436 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 OXNAD1Q96HP4 312 aaPredicted RBP10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 FEM1CQ96JP0 617 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PWWP2AQ96N64 755 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TTC25Q96NG3 672 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 SERPINB12Q96P63 405 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 MLPHQ9BV36 600 aaPredicted RBP10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 NEUROG2Q9H2A3 272 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ZDHHC18Q9NUE0 388 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PIH1D1Q9NWS0 290 aaKnown RBP10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 IL36AQ9UHA7 158 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CA14Q9ULX7 337 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CHMP2BQ9UQN3 213 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TICRRQ7Z2Z1 1910 aa10.77□□□□□ -0.69
TNFRSF1A-211ENST00000538363 A0A1W2PQ67 120 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 MAGEB16A2A368 324 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 LOC730098B7Z3J9 87 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 C1QTNF3-AMACRE9PGA6 284 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 MUSKO15146 869 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 AVILO75366 819 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TMEM63AO94886 807 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 NDST3O95803 873 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PRNPP04156 253 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 FGF1P05230 155 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 HLA-EP13747 358 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 HLA-DPA1P20036 260 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ELK3P41970 407 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 RGRP47804 291 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 GALNT3Q14435 633 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 MLF2Q15773 248 aaPredicted RBP10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CCDC38Q502W7 563 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 FNBP1LQ5T0N5 605 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TMEM215Q68D42 235 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 FBXO38Q6PIJ6 1188 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 GDPD4Q6W3E5 623 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 DPY19L3Q6ZPD9 716 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TRMT10CQ7L0Y3 403 aaKnown RBP10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PRPF39Q86UA1 669 aaKnown RBP10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CAMK1DQ8IU85 385 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 CCNJLQ8IV13 435 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 KDM1BQ8NB78 822 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 FBXO36Q8NEA4 188 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 GABPB2Q8TAK5 448 aaPredicted RBP10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ARRDC2Q8TBH0 407 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 GRIN3AQ8TCU5 1115 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 BLOC1S5Q8TDH9 187 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 HNRNPLLQ8WVV9 542 aaKnown RBP10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 LRRC39Q96DD0 335 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ERLEC1Q96DZ1 483 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 MYO19Q96H55 970 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 C9orf72Q96LT7 481 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 TUBGCP5Q96RT8 1024 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PPANQ9NQ55 473 aaKnown RBP10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ZC3H7BQ9UGR2 993 aaKnown RBP10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 SORCS3Q9UPU3 1222 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 PCDHB9Q9Y5E1 797 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 STON1Q9Y6Q2 735 aa10.76□□□□□ -0.69
TNFRSF1A-211ENST00000538363 EYSQ5T1H1 3165 aa10.75□□□□□ -0.69
TNFRSF1A-211ENST00000538363 GOLGA6L10A6NI86 522 aa10.75□□□□□ -0.69
TNFRSF1A-211ENST00000538363 ARNTLO00327 626 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms