RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 SUSD6Q92537 303 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 FGF13Q92913 245 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 TCEAL4Q96EI5 215 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 RPGRIP1Q96KN7 1286 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 ELF4Q99607 663 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 BAG1Q99933 345 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 C11orf70Q9BRQ4 267 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 PHF7Q9BWX1 381 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 ULBP1Q9BZM6 244 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 TASP1Q9H6P5 420 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 CAAP1Q9H8G2 361 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 NHEJ1Q9H9Q4 299 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 ZNF334Q9HCZ1 680 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 ACSS2Q9NR19 701 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 ABCC13Q9NSE7 274 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 OLA1Q9NTK5 396 aaKnown RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 ZNF446Q9NWS9 450 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 OXSMQ9NWU1 459 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 THG1LQ9NWX6 298 aaKnown RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 CLIC5Q9NZA1 410 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 IL37Q9NZH6 218 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 ADAM22Q9P0K1 906 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 NTMQ9P121 344 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 WDR35Q9P2L0 1181 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 CHORDC1Q9UHD1 332 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 CDH7Q9ULB5 785 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 STAP1Q9ULZ2 295 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 PRKAB1Q9Y478 270 aa4.47□□□□□ -1.69
SNHG1-208ENST00000538266 ZFP37Q9Y6Q3 630 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 RANBP2P49792 3224 aaKnown RBP4.47□□□□□ -1.69
SNHG1-208ENST00000538266 GREB1Q4ZG55 1949 aa4.46□□□□□ -1.69
SNHG1-208ENST00000538266 DENND4AQ7Z401 1863 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 FAM92AA1XBS5 289 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 C2orf78A6NCI8 922 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 ERICH4A6NGS2 130 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 YJEFN3A6XGL0 299 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 E7ENQ6 273 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 ARHGAP6O43182 974 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 PAPSS1O43252 624 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-208ENST00000538266 COCHO43405 550 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 RTN2O75298 545 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 GRAP2O75791 330 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 IL18BPO95998 194 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 MBL2P11226 248 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-208ENST00000538266 KRT3P12035 628 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 GZMAP12544 262 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 UNGP13051 313 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-208ENST00000538266 LAMP2P13473 410 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 RARGP13631 454 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 BMP7P18075 431 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 HDCP19113 662 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 ABCB4P21439 1286 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 ATP5C1P36542 298 aaKnown RBP4.46□□□□□ -1.7
SNHG1-208ENST00000538266 CCR2P41597 374 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 RPL34P49207 117 aaKnown RBP4.46□□□□□ -1.7
SNHG1-208ENST00000538266 KPNA1P52294 538 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-208ENST00000538266 SLURP1P55000 103 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 RNASE9P60153 205 aaKnown RBP4.46□□□□□ -1.7
SNHG1-208ENST00000538266 SLC6A3Q01959 620 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 ERCC6LQ2NKX8 1250 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 C2CD6Q53TS8 623 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 DCAF6Q58WW2 860 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 FAM78AQ5JUQ0 283 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 PRR31Q5SQ13 230 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 CATSPEREQ5SY80 951 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 CCDC122Q5T0U0 273 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 C10orf76Q5T2E6 689 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 STXBP5Q5T5C0 1151 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 SNX30Q5VWJ9 437 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 BSPRYQ5W0U4 402 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 TXNDC8Q6A555 127 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 PM20D1Q6GTS8 502 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 DCUN1D2Q6PH85 259 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 KLHDC10Q6PID8 442 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 WDR59Q6PJI9 974 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 OLFML1Q6UWY5 402 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 FAM183BPQ6ZVS7 135 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 MTSS1LQ765P7 747 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 MON1BQ7L1V2 547 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 SLC26A9Q7LBE3 791 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 TMEM150AQ86TG1 271 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 DDX42Q86XP3 938 aaKnown RBP eCLIP4.46□□□□□ -1.77e-6■■■□□ 16.5
SNHG1-208ENST00000538266 ADHFE1Q8IWW8 467 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 CCDC170Q8IYT3 715 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 CARFQ8N187 725 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 SCML4Q8N228 414 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 WDTC1Q8N5D0 677 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 CELF5Q8N6W0 485 aaKnown RBP4.46□□□□□ -1.7
SNHG1-208ENST00000538266 STPG3Q8N7X2 389 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 KIAA1958Q8N8K9 716 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 ARL14EPQ8N8R7 260 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-208ENST00000538266 C3orf20Q8ND61 904 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-208ENST00000538266 WDR48Q8TAF3 677 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 CLEC4CQ8WTT0 213 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 CTNNBL1Q8WYA6 563 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-208ENST00000538266 SMARCD2Q92925 531 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 E2F7Q96AV8 911 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 ZNF653Q96CK0 615 aa4.46□□□□□ -1.7
SNHG1-208ENST00000538266 MCRS1Q96EZ8 462 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms