RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 PLD5Q8N7P1 536 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 OR2W6PQ8NHA6 318 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 GRK7Q8WTQ7 553 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 AHCYL2Q96HN2 611 aaKnown RBP7.32□□□□□ -1.24
MSH6-209ENST00000538136 RDH14Q9HBH5 336 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 ETNK1Q9HBU6 452 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 RRN3Q9NYV6 651 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 IGSF9Q9P2J2 1179 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 NDOR1Q9UHB4 597 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 KCNK6Q9Y257 313 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 ZNF318Q5VUA4 2279 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 A0A1W2PQU0 124 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 C2orf81A6NN90 581 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 GIPC1O14908 333 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 PDHA1P08559 390 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 RHOQP17081 205 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 TYRP1P17643 537 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 BMP8BP34820 402 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 ARCN1P48444 511 aaKnown RBP7.32□□□□□ -1.24
MSH6-209ENST00000538136 CARSP49589 748 aaKnown RBP7.32□□□□□ -1.24
MSH6-209ENST00000538136 CDH4P55283 916 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 DHX34Q14147 1143 aaKnown RBP7.32□□□□□ -1.24
MSH6-209ENST00000538136 PDK2Q15119 407 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 MROH9Q5TGP6 573 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 NCEH1Q6PIU2 408 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 OR4K2Q8NGD2 314 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 ATL2Q8NHH9 583 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 TSACCQ96A04 125 aaPredicted RBP7.32□□□□□ -1.24
MSH6-209ENST00000538136 TTC1Q99614 292 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 MKRN2Q9H000 416 aaKnown RBP7.32□□□□□ -1.24
MSH6-209ENST00000538136 DTLQ9NZJ0 730 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 CALCOCO1Q9P1Z2 691 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 ZC3H7BQ9UGR2 993 aaKnown RBP7.32□□□□□ -1.24
MSH6-209ENST00000538136 RTTNQ86VV8 2226 aa7.32□□□□□ -1.24
MSH6-209ENST00000538136 CHD9Q3L8U1 2897 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 A0A0A6YYK5 440 aaPredicted RBP7.31□□□□□ -1.24
MSH6-209ENST00000538136 H0Y8X5 98 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 RAD51CO43502 376 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 CLDN7O95471 211 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 ACP5P13686 325 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 AMD1P17707 334 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 SPEM2Q0P670 501 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 CCDC15Q0P6D6 951 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 MTAPQ13126 283 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 CTBP1Q13363 440 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 FUT11Q495W5 492 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 ANKRD20A2Q5SQ80 823 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 ANKRD20A1Q5TYW2 823 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 ANKRD20A3Q5VUR7 823 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 FAM46CQ5VWP2 391 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 REXO1L1PQ8IX06 675 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 RNF10Q8N5U6 811 aaKnown RBP7.31□□□□□ -1.24
MSH6-209ENST00000538136 NPWQ8N729 165 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 CCNYL1Q8N7R7 359 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 RTL3Q8N8U3 475 aaKnown RBP7.31□□□□□ -1.24
MSH6-209ENST00000538136 PLD4Q96BZ4 506 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 NUDCD1Q96RS6 583 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 TSPAN18Q96SJ8 248 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 NDNQ99608 321 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 ADGRE3Q9BY15 652 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 RAB17Q9H0T7 212 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 IARS2Q9NSE4 1012 aaKnown RBP7.31□□□□□ -1.24
MSH6-209ENST00000538136 L1CAMP32004 1257 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 ACTR1BP42025 376 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 PTGER3P43115 390 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 ITGA8P53708 1063 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 ACTR1AP61163 376 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 ABRQ12979 859 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 TBX2Q13207 712 aaPredicted RBP7.31□□□□□ -1.24
MSH6-209ENST00000538136 BMPR2Q13873 1038 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 JAMLQ86YT9 394 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 IFT20Q8IY31 132 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 OR52K2Q8NGK3 314 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 RELTQ969Z4 430 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 GRAMD1AQ96CP6 724 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 VCPIP1Q96JH7 1222 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 TTYH3Q9C0H2 523 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 VRTNQ9H8Y1 702 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 CARS2Q9HA77 564 aaKnown RBP7.31□□□□□ -1.24
MSH6-209ENST00000538136 CPSF2Q9P2I0 782 aaKnown RBP7.31□□□□□ -1.24
MSH6-209ENST00000538136 SLC39A10Q9ULF5 831 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 CREBBPQ92793 2442 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.31□□□□□ -1.24
MSH6-209ENST00000538136 KANSL1LA0AUZ9 987 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 LRRC72A6NJI9 287 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 FMO4P31512 558 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 PBX1P40424 430 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 PLK1P53350 603 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 GDF10P55107 478 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 PREPLQ4J6C6 727 aaPredicted RBP7.31□□□□□ -1.24
MSH6-209ENST00000538136 CEP85LQ5SZL2 805 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 TMCO4Q5TGY1 634 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 NADSYN1Q6IA69 706 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 PRPF39Q86UA1 669 aaKnown RBP7.31□□□□□ -1.24
MSH6-209ENST00000538136 GLIS1Q8NBF1 620 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 PPP1R16AQ96I34 528 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 PBKQ96KB5 322 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 OXCT2Q9BYC2 517 aaPredicted RBP7.31□□□□□ -1.24
MSH6-209ENST00000538136 FAM153AQ9UHL3 310 aa7.31□□□□□ -1.24
MSH6-209ENST00000538136 EXOC1LA0A1B0GW35 172 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms