RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 AP4E1Q9UPM8 1137 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 CPQQ9Y646 472 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 AHDC1Q5TGY3 1603 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 TMEM191CA6NGB0 347 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 MYO1DO94832 1006 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 PRKCBP05771 671 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 MLNP12872 115 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 GP5P40197 560 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 CDH15P55291 814 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 TAS2R40P59535 323 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 COX10Q12887 443 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 TRIM32Q13049 653 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 KLF10Q13118 480 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 EMC2Q15006 297 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 SMU1Q2TAY7 513 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF284Q2VY69 593 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 PTPN20Q4JDL3 420 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 WDR45BQ5MNZ6 344 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 CRTC3Q6UUV7 619 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 ELMOD1Q8N336 334 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 COLGALT1Q8NBJ5 622 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 FBXO30Q8TB52 745 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 ITFG1Q8TB96 612 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 TBC1D15Q8TC07 691 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 TBATAQ96M53 351 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 LRRC40Q9H9A6 602 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 CCNB1IP1Q9NPC3 277 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 ARHGEF4Q9NR80 690 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 SLIT2O94813 1529 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 PIPSLA2A3N6 862 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 SNTNA6NMZ2 147 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 CYB561D2O14569 222 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 DFNA5O60443 496 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 FADS2O95864 444 aaKnown RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 GPIP06744 558 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 KPNA1P52294 538 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 MVKQ03426 396 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 IKBKEQ14164 716 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF181Q2M3W8 571 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 LSM12Q3MHD2 195 aaKnown RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF544Q6NX49 715 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 TFAP2DQ7Z6R9 452 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 HERC6Q8IVU3 1022 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 UNC45BQ8IWX7 931 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 ATPAF2Q8N5M1 289 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF341Q9BYN7 854 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 UNC93B1Q9H1C4 597 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 SP110Q9HB58 689 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 GMIPQ9P107 970 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 LIMD1Q9UGP4 676 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 USP18Q9UMW8 372 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 ITM2BQ9Y287 266 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 GRIP1Q9Y3R0 1128 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 PCDHB12Q9Y5F1 795 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 TRIM64A6NGJ6 449 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 ERVK-10P10266 1014 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 ITGAXP20702 1163 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 RBL1P28749 1068 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 HOXA10P31260 410 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 ACADSBP45954 432 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 CYP24A1Q07973 514 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 DDR2Q16832 855 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 TYSND1Q2T9J0 566 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 IQSEC1Q6DN90 963 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 NECAB2Q7Z6G3 386 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 PM20D2Q8IYS1 436 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 AADATQ8N5Z0 425 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 NIPA2Q8N8Q9 360 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 FAM156AQ8NDB6 213 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 SETD9Q8NE22 299 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 SLC35B2Q8TB61 432 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 VPS33AQ96AX1 596 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 NACC2Q96BF6 587 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 CCDC177Q9NQR7 707 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 DUSP12Q9UNI6 340 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 A0A1W2PQ72 361 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 E7ENX8 843 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 TNPO2O14787 897 aaKnown RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 PDE9AO76083 593 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 CETPP11597 493 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 PRKCHP24723 683 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 ALDH4A1P30038 563 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 SOX10P56693 466 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 PRKCQQ04759 706 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 QPRTQ15274 297 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 AGAP9Q5VTM2 703 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF773Q6PK81 442 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 C16orf62Q7Z3J2 963 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 HIPK1Q86Z02 1210 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 CCDC28AQ8IWP9 274 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 TNS4Q8IZW8 715 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 ASCC1Q8N9N2 400 aaKnown RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF540Q8NDQ6 660 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 UTP15Q8TED0 518 aaKnown RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 CDHR1Q96JP9 859 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 CPNE1Q99829 537 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 EBF4Q9BQW3 602 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 GON7Q9BXV9 100 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 IRF2BPLQ9H1B7 796 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms