RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 ARNTP27540 789 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 SLC1A2P43004 574 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 DSG1Q02413 1049 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 GNA12Q03113 381 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 FAM83EQ2M2I3 478 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 AGAP9Q5VTM2 703 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 NADSYN1Q6IA69 706 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 SLC39A5Q6ZMH5 540 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 HERC6Q8IVU3 1022 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 PLD6Q8N2A8 252 aaKnown RBP13.7□□□□□ -0.22
SMG6-203ENST00000536871 ZNF558Q96NG5 402 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 SORT1Q99523 831 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 MGME1Q9BQP7 344 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 HERC2P3Q9BVR0 1158 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 C20orf27Q9GZN8 174 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 DRC3Q9H069 523 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 MRPL46Q9H2W6 279 aaKnown RBP13.7□□□□□ -0.22
SMG6-203ENST00000536871 PDFQ9HBH1 243 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 ARL8BQ9NVJ2 186 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 TRIM33Q9UPN9 1127 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 RUVBL2Q9Y230 463 aaKnown RBP13.7□□□□□ -0.22
SMG6-203ENST00000536871 RAP2CQ9Y3L5 183 aa13.7□□□□□ -0.22
SMG6-203ENST00000536871 A0A1B0GVM2 712 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 ABHD14A-ACY1A0A1B0GW23 586 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 ANKRD33BA6NCL7 494 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 TCAF2A6NFQ2 919 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 SLC22A2O15244 555 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 KDELR3O43731 214 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 MAGEC1O60732 1142 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 RBP1P09455 135 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 KITP10721 976 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 PRDX6P30041 224 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 PRAMEP78395 509 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 DSC2Q02487 901 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 NSUN2Q08J23 767 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMG6-203ENST00000536871 PRKAA1Q13131 559 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 CES4AQ5XG92 561 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 LRRC8EQ6NSJ5 796 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 SLC25A41Q8N5S1 370 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 GPR150Q8NGU9 434 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 BRSK1Q8TDC3 778 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 TMEM169Q96HH4 297 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 PSKH2Q96QS6 385 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 CDH19Q9H159 772 aa13.69□□□□□ -0.22
SMG6-203ENST00000536871 NOP53Q9NZM5 478 aaKnown RBP13.69□□□□□ -0.22
SMG6-203ENST00000536871 UBA2Q9UBT2 640 aaPredicted RBP13.69□□□□□ -0.22
SMG6-203ENST00000536871 TANC1Q9C0D5 1861 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.68□□□□□ -0.22
SMG6-203ENST00000536871 GOLGA8QA0A0J9YX86 632 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 GOLGA8OA6NCC3 632 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 GOLGA8NF8WBI6 632 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 GSC2O15499 205 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 ITM2AO43736 263 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 NPHS1O60500 1241 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 CRTAMO95727 393 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 LAG3P18627 525 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 GABRB3P28472 473 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 ADSLP30566 484 aaPredicted RBP13.68□□□□□ -0.22
SMG6-203ENST00000536871 DNAJB13P59910 316 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 ZNF177Q13360 481 aaPredicted RBP13.68□□□□□ -0.22
SMG6-203ENST00000536871 CTBP1Q13363 440 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 PLD1Q13393 1074 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 MSLNQ13421 630 aaPredicted RBP13.68□□□□□ -0.22
SMG6-203ENST00000536871 ZRSR2Q15696 482 aaKnown RBP13.68□□□□□ -0.22
SMG6-203ENST00000536871 RALGPS1Q5JS13 557 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 C6orf163Q5TEZ5 329 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 MRNIPQ6NTE8 343 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 TAS1R1Q7RTX1 841 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 PIWIL4Q7Z3Z4 852 aaKnown RBP13.68□□□□□ -0.22
SMG6-203ENST00000536871 ALYREFQ86V81 257 aaKnown RBP13.68□□□□□ -0.22
SMG6-203ENST00000536871 TMEM173Q86WV6 379 aaPredicted RBP13.68□□□□□ -0.22
SMG6-203ENST00000536871 DENND6AQ8IWF6 608 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 AFAP1L2Q8N4X5 818 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.68□□□□□ -0.22
SMG6-203ENST00000536871 TEX9Q8N6V9 391 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 UTP4Q969X6 686 aaKnown RBP13.68□□□□□ -0.22
SMG6-203ENST00000536871 CMTM5Q96DZ9 223 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 SCLYQ96I15 445 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 ELMO2Q96JJ3 720 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 SCYL1Q96KG9 808 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 KLHL5Q96PQ7 755 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 NUDCD1Q96RS6 583 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 SEMA3CQ99985 751 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 CCDC106Q9BWC9 280 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 RNF208Q9H0X6 261 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 CAB39LQ9H9S4 337 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 POPDC3Q9HBV1 291 aa13.68□□□□□ -0.22
SMG6-203ENST00000536871 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.68□□□□□ -0.22
SMG6-203ENST00000536871 MARCOQ9UEW3 520 aaPredicted RBP13.68□□□□□ -0.22
SMG6-203ENST00000536871 NDST3O95803 873 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 PENKP01210 267 aaPredicted RBP13.67□□□□□ -0.22
SMG6-203ENST00000536871 ATXN1LP0C7T5 689 aaKnown RBP13.67□□□□□ -0.22
SMG6-203ENST00000536871 CCL5P13501 91 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 OGNP20774 298 aaKnown RBP13.67□□□□□ -0.22
SMG6-203ENST00000536871 KCNQ1P51787 676 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 OXCT1P55809 520 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 RAB33AQ14088 237 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 RCN2Q14257 317 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 DLG2Q15700 870 aa13.67□□□□□ -0.22
SMG6-203ENST00000536871 PABPC1LQ4VXU2 614 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms