RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 SLC12A1Q13621 1099 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 AUHQ13825 339 aaKnown RBP7.23□□□□□ -1.25
YBX3-206ENST00000536823 DUOXA1Q1HG43 343 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 HNRNPA1L2Q32P51 320 aaKnown RBP7.23□□□□□ -1.25
YBX3-206ENST00000536823 SLC25A52Q3SY17 297 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 ANO6Q4KMQ2 910 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 C2CD6Q53TS8 623 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 TRIM61Q5EBN2 209 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 ZNF776Q68DI1 518 aaPredicted RBP7.23□□□□□ -1.25
YBX3-206ENST00000536823 CXorf57Q6NSI4 855 aaKnown RBP7.23□□□□□ -1.25
YBX3-206ENST00000536823 TRNP1Q6NT89 227 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 FBXL22Q6P050 247 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 FBXL19Q6PCT2 694 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 ARCQ7LC44 396 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 RABEPKQ7Z6M1 372 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 CACUL1Q86Y37 369 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 SLC41A1Q8IVJ1 513 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 CCAR2Q8N163 923 aaKnown RBP7.23□□□□□ -1.25
YBX3-206ENST00000536823 CEP76Q8TAP6 659 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 CPA5Q8WXQ8 436 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 GAL3ST3Q96A11 431 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 TOE1Q96GM8 510 aaKnown RBP7.23□□□□□ -1.25
YBX3-206ENST00000536823 ZNF419Q96HQ0 510 aaPredicted RBP7.23□□□□□ -1.25
YBX3-206ENST00000536823 MRGPRX3Q96LB0 322 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 RPRD1AQ96P16 312 aaPredicted RBP7.23□□□□□ -1.25
YBX3-206ENST00000536823 TBCBQ99426 244 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 BPIFA3Q9BQP9 254 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 NUSAP1Q9BXS6 441 aaKnown RBP7.23□□□□□ -1.25
YBX3-206ENST00000536823 NAT10Q9H0A0 1025 aaKnown RBP7.23□□□□□ -1.25
YBX3-206ENST00000536823 PCED1AQ9H1Q7 454 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 ZCCHC4Q9H5U6 513 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 TMEM9BQ9NQ34 198 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 PRSS16Q9NQE7 514 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 ITM2CQ9NQX7 267 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 TMEM74BQ9NUR3 256 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 C19orf73Q9NVV2 129 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 ARHGEF38Q9NXL2 777 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 SUN2Q9UH99 717 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 TMEM59LQ9UK28 342 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 VANGL2Q9ULK5 521 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 PAXBP1Q9Y5B6 917 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 HS3ST4Q9Y661 456 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 NYNRINQ9P2P1 1898 aaKnown RBP7.23□□□□□ -1.25
YBX3-206ENST00000536823 USP24Q9UPU5 2620 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 FAM170AA1A519 330 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 MEI4A8MW99 385 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 I6L893 689 aaPredicted RBP7.22□□□□□ -1.25
YBX3-206ENST00000536823 CDX4O14627 284 aaPredicted RBP7.22□□□□□ -1.25
YBX3-206ENST00000536823 CLDN11O75508 207 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 ADCY5O95622 1261 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 CFIP05156 583 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 SRPRAP08240 638 aaKnown RBP7.22□□□□□ -1.25
YBX3-206ENST00000536823 SERPINF2P08697 491 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 OXTRP30559 389 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 RDXP35241 583 aaKnown RBP7.22□□□□□ -1.25
YBX3-206ENST00000536823 GDNFP39905 211 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 PLK1P53350 603 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 GSCP56915 257 aaPredicted RBP7.22□□□□□ -1.25
YBX3-206ENST00000536823 RPS14P62263 151 aaKnown RBP7.22□□□□□ -1.25
YBX3-206ENST00000536823 IRX4P78413 519 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 ECT2LQ008S8 904 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 SULT2A1Q06520 285 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 PTP4A2Q12974 167 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 CLEC16AQ2KHT3 1053 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 TTC31Q49AM3 519 aaPredicted RBP7.22□□□□□ -1.25
YBX3-206ENST00000536823 C5orf22Q49AR2 442 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 PPM1JQ5JR12 505 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 WDR45BQ5MNZ6 344 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 SYCP2LQ5T4T6 812 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 ACBD5Q5T8D3 534 aaPredicted RBP7.22□□□□□ -1.25
YBX3-206ENST00000536823 RNF219Q5W0B1 726 aaPredicted RBP7.22□□□□□ -1.25
YBX3-206ENST00000536823 BNIPLQ7Z465 357 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 C14orf80Q86SX3 495 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 DHX40Q8IX18 779 aaKnown RBP7.22□□□□□ -1.25
YBX3-206ENST00000536823 ZNF683Q8IZ20 524 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 APCDD1Q8J025 514 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 DEFB119Q8N690 84 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 CADM4Q8NFZ8 388 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 SLC30A5Q8TAD4 765 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 GRIN3AQ8TCU5 1115 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 DNASE2BQ8WZ79 361 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 IGSF8Q969P0 613 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 C11orf70Q9BRQ4 267 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 FUCA2Q9BTY2 467 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 NUP58Q9BVL2 599 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 GPR174Q9BXC1 333 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 TKTL2Q9H0I9 626 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 SIK2Q9H0K1 926 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 MIR1-1HGQ9H1L0 117 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 RSPH9Q9H1X1 276 aaPredicted RBP7.22□□□□□ -1.25
YBX3-206ENST00000536823 CCDC86Q9H6F5 360 aaKnown RBP7.22□□□□□ -1.25
YBX3-206ENST00000536823 WDCPQ9H6R7 721 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 CARS2Q9HA77 564 aaKnown RBP7.22□□□□□ -1.25
YBX3-206ENST00000536823 CAPN10Q9HC96 672 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 ANLNQ9NQW6 1124 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 SUSD2Q9UGT4 822 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 ERVW-1Q9UQF0 538 aa7.22□□□□□ -1.25
YBX3-206ENST00000536823 IGLV3-10A0A075B6K4 115 aa7.21□□□□□ -1.26
YBX3-206ENST00000536823 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.21□□□□□ -1.26
YBX3-206ENST00000536823 EDDM13A0A1B0GTR0 161 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms