RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 LRGUKQ96M69 825 aa16.18■□□□□ 0.18
CHMP1A-202ENST00000535997 UTP6Q9NYH9 597 aaKnown RBP16.18■□□□□ 0.18
CHMP1A-202ENST00000535997 PACSIN3Q9UKS6 424 aa16.18■□□□□ 0.18
CHMP1A-202ENST00000535997 DTNAQ9Y4J8 743 aa16.18■□□□□ 0.18
CHMP1A-202ENST00000535997 TCAF2A6NFQ2 919 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 KCNU1A8MYU2 1149 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 CFLARO15519 480 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 POMCP01189 267 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 XRCC1P18887 633 aaPredicted RBP16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 LEPRP48357 1165 aaKnown RBP16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 TSPY1Q01534 308 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 CEACAM7Q14002 265 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 PDK3Q15120 406 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 PAN2Q504Q3 1202 aaKnown RBP16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 RARS2Q5T160 578 aaKnown RBP16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 RASIP1Q5U651 963 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 AGAP9Q5VTM2 703 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 OVOS1Q6IE37 1185 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 C2orf69Q8N8R5 385 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 CATSPER1Q8NEC5 780 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 CASP10Q92851 521 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 MTG1Q9BT17 334 aaPredicted RBP16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 SLC25A51Q9H1U9 297 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 EML4Q9HC35 981 aaKnown RBP16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 IGSF5Q9NSI5 407 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 IPO11Q9UI26 975 aaKnown RBP16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 HEATR9A2RTY3 570 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 WASH4PA8MWX3 477 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 E9PAM4 449 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 SDHDO14521 159 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 TNFRSF10BO14763 440 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 DUSP11O75319 330 aaKnown RBP16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 BCAS2O75934 225 aaPredicted RBP16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 IGHA2P01877 340 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 CTSHP09668 335 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 ENO3P13929 434 aaPredicted RBP16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 RAB27AP51159 221 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 SLC5A3P53794 718 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 WNT3AP56704 352 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 MS4A2Q01362 244 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 GNASQ5JWF2 1037 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 CHSY3Q70JA7 882 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 KDELC2Q7Z4H8 507 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 MFN1Q8IWA4 741 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 RSPH1Q8WYR4 309 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 TMEM209Q96SK2 561 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 SYT17Q9BSW7 474 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 ATXN3LQ9H3M9 355 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 POMKQ9H5K3 350 aa16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 AGO3Q9H9G7 860 aaKnown RBP16.17■□□□□ 0.18
CHMP1A-202ENST00000535997 ARHGEF37A1IGU5 675 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 CAPN8A6NHC0 703 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 MSI1O43347 362 aaKnown RBP16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 IPO13O94829 963 aaKnown RBP16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 RPLP2P05387 115 aaKnown RBP16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 RBP1P09455 135 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 CHRM1P11229 460 aaPredicted RBP16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 AKR1A1P14550 325 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 GRIK1P39086 918 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 RGS2P41220 211 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 RENBPP51606 427 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 CHN2P52757 468 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 POLE2P56282 527 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 GALNT1Q10472 559 aaPredicted RBP16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 GDF6Q6KF10 455 aaPredicted RBP16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 KLC3Q6P597 504 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 CNSTQ6PJW8 725 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 SCD5Q86SK9 330 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 SERINC5Q86VE9 423 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 PELI3Q8N2H9 469 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 AFAP1L2Q8N4X5 818 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 ADCY4Q8NFM4 1077 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 FATE1Q969F0 183 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 TSPAN17Q96FV3 270 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 RANBP9Q96S59 729 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 SH3GL3Q99963 347 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 MRPL1Q9BYD6 325 aaKnown RBP16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 OSER1Q9NX31 292 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 HS3ST4Q9Y661 456 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 A0A0U1RQF3 1178 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 PAPSS2O95340 614 aaPredicted RBP16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 CHRNA4P43681 627 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 PKNOX1P55347 436 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 MRPS22P82650 360 aaKnown RBP16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 STX5Q13190 355 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 TUSC3Q13454 348 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 SEPT6Q14141 434 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 CSHL1Q14406 222 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 SLC14A2Q15849 920 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 KDELC1Q6UW63 502 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 UGT2A3Q6UWM9 527 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 GALNT7Q86SF2 657 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 SPATA2LQ8IUW3 424 aaPredicted RBP16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 MARVELD2Q8N4S9 558 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 SPPL2BQ8TCT7 592 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 SGF29Q96ES7 293 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 GCNAQ96QF7 691 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 SPATA16Q9BXB7 569 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 Q9H521 79 aa16.16■□□□□ 0.18
CHMP1A-202ENST00000535997 ATP13A1Q9HD20 1204 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms