RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 CDKL3Q8IVW4 592 aaPredicted RBP12.19□□□□□ -0.46
CHD4-203ENST00000535717 TMEFF1Q8IYR6 380 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 SUMF1Q8NBK3 374 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 OR14C36Q8NHC7 312 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 SLC35B2Q8TB61 432 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 ARRDC2Q8TBH0 407 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 ATG4AQ8WYN0 398 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 MS4A14Q96JA4 679 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 PBKQ96KB5 322 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 TEKT5Q96M29 485 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 ZNF641Q96N77 438 aaPredicted RBP12.19□□□□□ -0.46
CHD4-203ENST00000535717 AGAP3Q96P47 875 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 OSBPL9Q96SU4 736 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 PHOX2BQ99453 314 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 BTBD1Q9H0C5 482 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 SUV39H2Q9H5I1 410 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 HAUS2Q9NVX0 235 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.19□□□□□ -0.46
CHD4-203ENST00000535717 DKK3Q9UBP4 350 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 SNX12Q9UMY4 172 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 SPAG17Q6Q759 2223 aa12.19□□□□□ -0.46
CHD4-203ENST00000535717 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.18□□□□□ -0.46
CHD4-203ENST00000535717 TSPAN11A1L157 253 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 BCLAF3A2AJT9 711 aaKnown RBP12.18□□□□□ -0.46
CHD4-203ENST00000535717 TRAFD1O14545 582 aaPredicted RBP12.18□□□□□ -0.46
CHD4-203ENST00000535717 FANCGO15287 622 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 PLRG1O43660 514 aaKnown RBP12.18□□□□□ -0.46
CHD4-203ENST00000535717 MMP2P08253 660 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 ADRB3P13945 408 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 TIMP2P16035 220 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 CES1P23141 567 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 CD68P34810 354 aaPredicted RBP12.18□□□□□ -0.46
CHD4-203ENST00000535717 ABL2P42684 1182 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 NEK3P51956 506 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 TRAF2Q12933 501 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 ELF2Q15723 593 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 LONRF2Q1L5Z9 754 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 FBXL19Q6PCT2 694 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 LPCAT2Q7L5N7 544 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 SLC41A1Q8IVJ1 513 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 ZNF567Q8N184 647 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 RASGEF1CQ8N431 466 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 CADM4Q8NFZ8 388 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 HCAR2Q8TDS4 363 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 COG1Q8WTW3 980 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 C1orf54Q8WWF1 131 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 ECHDC3Q96DC8 303 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 SEMA4AQ9H3S1 761 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 C6orf106Q9H6K1 298 aaPredicted RBP12.18□□□□□ -0.46
CHD4-203ENST00000535717 USP29Q9HBJ7 922 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 GLOD4Q9HC38 313 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 DNPEPQ9ULA0 475 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 SMG5Q9UPR3 1016 aaKnown RBP12.18□□□□□ -0.46
CHD4-203ENST00000535717 PCDHGC4Q9Y5F7 938 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 THADAQ6YHU6 1953 aa12.18□□□□□ -0.46
CHD4-203ENST00000535717 ANKRD36A6QL64 1941 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 USP34Q70CQ2 3546 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 FAM47DPA6NHR8 397 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 LRRC72A6NJI9 287 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 C10orf142B7Z368 130 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 PROB1E7EW31 1015 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 KCNN4O15554 427 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 SPINT1O43278 529 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 HTRA2O43464 458 aaPredicted RBP12.17□□□□□ -0.46
CHD4-203ENST00000535717 LIASO43766 372 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 SOCS5O75159 536 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 RHOBTB1O94844 696 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 CD86P42081 329 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 PTGER3P43115 390 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 SKOR1P84550 965 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 CCDC15Q0P6D6 951 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 OASLQ15646 514 aaKnown RBP12.17□□□□□ -0.46
CHD4-203ENST00000535717 LRRC73Q5JTD7 316 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 SPDYCQ5MJ68 293 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 PAPD7Q5XG87 772 aaKnown RBP12.17□□□□□ -0.46
CHD4-203ENST00000535717 BRAT1Q6PJG6 821 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 ARMCX6Q7L4S7 300 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 TTC7BQ86TV6 843 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 PRPF39Q86UA1 669 aaKnown RBP12.17□□□□□ -0.46
CHD4-203ENST00000535717 FAM71DQ8N9W8 422 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 OR2T34Q8NGX1 318 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 NKD2Q969F2 451 aaPredicted RBP12.17□□□□□ -0.46
CHD4-203ENST00000535717 IMP4Q96G21 291 aaKnown RBP12.17□□□□□ -0.46
CHD4-203ENST00000535717 HSPA12BQ96MM6 686 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 VAT1Q99536 393 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 NAPGQ99747 312 aaPredicted RBP12.17□□□□□ -0.46
CHD4-203ENST00000535717 FRMD8P1Q9BZ68 369 aaPredicted RBP12.17□□□□□ -0.46
CHD4-203ENST00000535717 PCED1AQ9H1Q7 454 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 SLC25A51Q9H1U9 297 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 KDM4CQ9H3R0 1056 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 SMARCAL1Q9NZC9 954 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 KLHL8Q9P2G9 620 aaPredicted RBP12.17□□□□□ -0.46
CHD4-203ENST00000535717 TRHDEQ9UKU6 1024 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 RAB23Q9ULC3 237 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 TTC7AQ9ULT0 858 aaPredicted RBP12.17□□□□□ -0.46
CHD4-203ENST00000535717 ZKSCAN5Q9Y2L8 839 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 RAI2Q9Y5P3 530 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 FADS3Q9Y5Q0 445 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 ZNF292O60281 2723 aa12.17□□□□□ -0.46
CHD4-203ENST00000535717 GON4LQ3T8J9 2241 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms