RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 AGO1Q9UL18 857 aaKnown RBP18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 PDE9AO76083 593 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 FAM153BP0C7A2 387 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 CTPS1P17812 591 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 TFEBP19484 476 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 FAM153CQ494X1 144 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 RBM23Q86U06 439 aaKnown RBP18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 C8orf59Q8N0T1 100 aaPredicted RBP18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 NDNQ99608 321 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 MYOCQ99972 504 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 GDF3Q9NR23 364 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 VPS4AQ9UN37 437 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 CALCAP01258 141 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 CAPSQ13938 189 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 TARBP2Q15633 366 aaKnown RBP18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 TIMM50Q3ZCQ8 353 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 LRRC38Q5VT99 294 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 MZT2AQ6P582 158 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 ZFRQ96KR1 1074 aaKnown RBP18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 RNF157Q96PX1 679 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 TTLL2Q9BWV7 592 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 MORF4L1Q9UBU8 362 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 C2CD2Q9Y426 696 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 UBIAD1Q9Y5Z9 338 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 ADAMTS13Q76LX8 1427 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 DIP2BQ9P265 1576 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 H0Y858 1186 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 ST3GAL1Q11201 340 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 MAPKAPK3Q16644 382 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 BTN2A1Q7KYR7 527 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 APTXQ7Z2E3 356 aaKnown RBP18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 FAM124AQ86V42 546 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 PARGQ86W56 976 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 MKL1Q969V6 931 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 AGXT2Q9BYV1 514 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 ZFP14Q9HCL3 533 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 CYP1A2P05177 515 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 CDC25CP30307 473 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 RPTNQ6XPR3 784 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 DLG3Q92796 817 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 TRAPPC9Q96Q05 1148 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 LEF1Q9UJU2 399 aaPredicted RBP18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 GLUD1P00367 558 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 ITGA2P17301 1181 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 LPOP22079 712 aaPredicted RBP18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 NAGLUP54802 743 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 PSMD4P55036 377 aaKnown RBP18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 MAPK11Q15759 364 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 SLC38A2Q96QD8 506 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 ABCG4Q9H172 646 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 SAR1AQ9NR31 198 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 OPLAHO14841 1288 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 CES1P23141 567 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 TNFSF9P41273 254 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 SMIM11AP58511 58 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 RPL38P63173 70 aaKnown RBP18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 OFCC1Q8IZS5 231 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 FBXL16Q8N461 479 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 ZNF248Q8NDW4 579 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 MARK4Q96L34 752 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 AVILO75366 819 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 MYBL2P10244 700 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 CCNA2P20248 432 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 EPS8Q12929 822 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 NOGQ13253 232 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 ADAMTSL2Q86TH1 951 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 UBASH3BQ8TF42 649 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 REXO5Q96IC2 774 aaKnown RBP18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 DCUN1D5Q9BTE7 237 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 KCNMB3Q9NPA1 279 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 MAT2BQ9NZL9 334 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 SH3GLB1Q9Y371 365 aa18.29■□□□□ 0.52
SFSWAP-203ENST00000535236 A0A087X0B3 334 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 ERAL1O75616 437 aaKnown RBP18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 ATP1A4Q13733 1029 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 GALNT3Q14435 633 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 VPS35Q96QK1 796 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 LIASO43766 372 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 SLC25A14O95258 325 aaPredicted RBP18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 CBX6O95503 412 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 DDR1Q08345 913 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 SPDYCQ5MJ68 293 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 FAM171BQ6P995 826 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 GPRIN3Q6ZVF9 776 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 IKBIPQ70UQ0 350 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 AADATQ8N5Z0 425 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 TMEM161BQ8NDZ6 487 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 EXOC2Q96KP1 924 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 CLN6Q9NWW5 311 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 ASF1AQ9Y294 204 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 OR6C75A6NL08 312 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 ASNA1O43681 348 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 TLR5O60602 858 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 OTCP00480 354 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 ELFN1P0C7U0 828 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 STAT5AP42229 794 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 RAB10P61026 200 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 TAB1Q15750 504 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 GCNT7Q6ZNI0 430 aa18.28■□□□□ 0.52
SFSWAP-203ENST00000535236 PGM2Q96G03 612 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms