RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 IL18RAPO95256 599 aa9□□□□□ -0.97
SORL1-213ENST00000534754 PIGNO95427 931 aa9□□□□□ -0.97
SORL1-213ENST00000534754 LTFP02788 710 aa9□□□□□ -0.97
SORL1-213ENST00000534754 PSMD8P48556 350 aa9□□□□□ -0.97
SORL1-213ENST00000534754 PSME3P61289 254 aa9□□□□□ -0.97
SORL1-213ENST00000534754 OSTNP61366 133 aa9□□□□□ -0.97
SORL1-213ENST00000534754 CDC42EP1Q00587 391 aa9□□□□□ -0.97
SORL1-213ENST00000534754 IRF9Q00978 393 aa9□□□□□ -0.97
SORL1-213ENST00000534754 FAM187BQ17R55 369 aa9□□□□□ -0.97
SORL1-213ENST00000534754 ARL13AQ5H913 290 aaPredicted RBP9□□□□□ -0.97
SORL1-213ENST00000534754 C1QTNF12Q5T7M4 302 aa9□□□□□ -0.97
SORL1-213ENST00000534754 LIPMQ5VYY2 423 aa9□□□□□ -0.97
SORL1-213ENST00000534754 EEF1DP3Q658K8 133 aa9□□□□□ -0.97
SORL1-213ENST00000534754 TMEM198Q66K66 360 aa9□□□□□ -0.97
SORL1-213ENST00000534754 ELMSAN1Q6PJG2 1045 aa9□□□□□ -0.97
SORL1-213ENST00000534754 LCLAT1Q6UWP7 414 aa9□□□□□ -0.97
SORL1-213ENST00000534754 MPZL3Q6UWV2 235 aa9□□□□□ -0.97
SORL1-213ENST00000534754 ZYG11AQ6WRX3 759 aa9□□□□□ -0.97
SORL1-213ENST00000534754 NCCRP1Q6ZVX7 275 aaPredicted RBP9□□□□□ -0.97
SORL1-213ENST00000534754 CATSPER4Q7RTX7 472 aa9□□□□□ -0.97
SORL1-213ENST00000534754 TTC30AQ86WT1 665 aa9□□□□□ -0.97
SORL1-213ENST00000534754 FAM156AQ8NDB6 213 aa9□□□□□ -0.97
SORL1-213ENST00000534754 URGCPQ8TCY9 931 aa9□□□□□ -0.97
SORL1-213ENST00000534754 BORCS5Q969J3 196 aa9□□□□□ -0.97
SORL1-213ENST00000534754 NPAS2Q99743 824 aa9□□□□□ -0.97
SORL1-213ENST00000534754 EFHD1Q9BUP0 239 aa9□□□□□ -0.97
SORL1-213ENST00000534754 ACE2Q9BYF1 805 aaPredicted RBP9□□□□□ -0.97
SORL1-213ENST00000534754 IL22Q9GZX6 179 aa9□□□□□ -0.97
SORL1-213ENST00000534754 C2orf40Q9H1Z8 148 aa9□□□□□ -0.97
SORL1-213ENST00000534754 DTLQ9NZJ0 730 aa9□□□□□ -0.97
SORL1-213ENST00000534754 PRKAG2Q9UGJ0 569 aa9□□□□□ -0.97
SORL1-213ENST00000534754 CDH7Q9ULB5 785 aa9□□□□□ -0.97
SORL1-213ENST00000534754 BARX2Q9UMQ3 279 aaPredicted RBP9□□□□□ -0.97
SORL1-213ENST00000534754 CROCCQ5TZA2 2017 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 ATG2AQ2TAZ0 1938 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 CHD9Q3L8U1 2897 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 ACKR2O00590 384 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 HTRA2O43464 458 aaPredicted RBP8.99□□□□□ -0.97
SORL1-213ENST00000534754 TIMM44O43615 452 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 ZNF12P17014 697 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 FGFR3P22607 806 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 SLC7A1P30825 629 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 GRIA4P48058 902 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 RGS7P49802 495 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 CDH15P55291 814 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 NSUN2Q08J23 767 aaKnown RBP eCLIP8.99□□□□□ -0.97
SORL1-213ENST00000534754 DSC3Q14574 896 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 MTX3Q5HYI7 312 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 GRAMD4Q6IC98 578 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 CES3Q6UWW8 571 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 OLFML1Q6UWY5 402 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 RTN4RL1Q86UN2 441 aaPredicted RBP8.99□□□□□ -0.97
SORL1-213ENST00000534754 HERC6Q8IVU3 1022 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 C1orf127Q8N9H9 656 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 C12orf43Q96C57 262 aaKnown RBP8.99□□□□□ -0.97
SORL1-213ENST00000534754 UHRF1Q96T88 793 aaPredicted RBP8.99□□□□□ -0.97
SORL1-213ENST00000534754 RPF1Q9H9Y2 349 aaKnown RBP8.99□□□□□ -0.97
SORL1-213ENST00000534754 PFDN4Q9NQP4 134 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 PRMT7Q9NVM4 692 aaPredicted RBP8.99□□□□□ -0.97
SORL1-213ENST00000534754 HESX1Q9UBX0 185 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 EBF1Q9UH73 591 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 PTBP2Q9UKA9 531 aaKnown RBP8.99□□□□□ -0.97
SORL1-213ENST00000534754 TSPAN16Q9UKR8 245 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 KIAA1257Q9ULG3 409 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.99□□□□□ -0.97
SORL1-213ENST00000534754 SNX13Q9Y5W8 968 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 COPG1Q9Y678 874 aaKnown RBP8.99□□□□□ -0.97
SORL1-213ENST00000534754 SCN1AP35498 2009 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 CHD7Q9P2D1 2997 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 TRIM64CA6NLI5 447 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 PSMD12O00232 456 aaPredicted RBP8.99□□□□□ -0.97
SORL1-213ENST00000534754 RNF103O00237 685 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 CLASP2O75122 1294 aaKnown RBP8.99□□□□□ -0.97
SORL1-213ENST00000534754 ITGB3P05106 788 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 C2P06681 752 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 CYP3A5P20815 502 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 ATICP31939 592 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 SLC5A3P53794 718 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 PFKPQ01813 784 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 SLC6A3Q01959 620 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 FPGSQ05932 587 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 TRAP1Q12931 704 aaKnown RBP8.99□□□□□ -0.97
SORL1-213ENST00000534754 MPP3Q13368 585 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 ZNF829Q3KNS6 432 aaPredicted RBP8.99□□□□□ -0.97
SORL1-213ENST00000534754 UBXN11Q5T124 520 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 NCBP2-AS2Q69YL0 99 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 ZBTB49Q6ZSB9 765 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 TMEM199Q8N511 208 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 ZNF513Q8N8E2 541 aaPredicted RBP8.99□□□□□ -0.97
SORL1-213ENST00000534754 FAM47BQ8NA70 645 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.99□□□□□ -0.97
SORL1-213ENST00000534754 TNIP2Q8NFZ5 429 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 PBXIP1Q96AQ6 731 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 THAP11Q96EK4 314 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 MARK4Q96L34 752 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 TSNARE1Q96NA8 513 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 CSPG4P5Q96PW8 444 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 SLC29A1Q99808 456 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 CIB1Q99828 191 aa8.99□□□□□ -0.97
SORL1-213ENST00000534754 DCUN1D5Q9BTE7 237 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms