RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 ILKQ13418 452 aa23.57■■□□□ 1.36
YIF1A-213ENST00000534374 PIGHQ14442 188 aaPredicted RBP23.57■■□□□ 1.36
YIF1A-213ENST00000534374 PPP6R3Q5H9R7 873 aaPredicted RBP23.57■■□□□ 1.36
YIF1A-213ENST00000534374 TMPRSS12Q86WS5 348 aa23.57■■□□□ 1.36
YIF1A-213ENST00000534374 SLC22A18ASQ8N1D0 253 aa23.57■■□□□ 1.36
YIF1A-213ENST00000534374 LZTR1Q8N653 840 aa23.57■■□□□ 1.36
YIF1A-213ENST00000534374 CPLX3Q8WVH0 158 aa23.57■■□□□ 1.36
YIF1A-213ENST00000534374 CELF6Q96J87 481 aaKnown RBP23.57■■□□□ 1.36
YIF1A-213ENST00000534374 CWC15Q9P013 229 aaKnown RBP23.57■■□□□ 1.36
YIF1A-213ENST00000534374 SPINT1O43278 529 aa23.56■■□□□ 1.36
YIF1A-213ENST00000534374 CKMT2P17540 419 aa23.56■■□□□ 1.36
YIF1A-213ENST00000534374 ZSCAN23Q3MJ62 389 aa23.56■■□□□ 1.36
YIF1A-213ENST00000534374 DHRS13Q6UX07 377 aa23.56■■□□□ 1.36
YIF1A-213ENST00000534374 NETO2Q8NC67 525 aa23.56■■□□□ 1.36
YIF1A-213ENST00000534374 CENPTQ96BT3 561 aa23.56■■□□□ 1.36
YIF1A-213ENST00000534374 ZNF641Q96N77 438 aaPredicted RBP23.56■■□□□ 1.36
YIF1A-213ENST00000534374 SUV39H2Q9H5I1 410 aa23.56■■□□□ 1.36
YIF1A-213ENST00000534374 ZWILCHQ9H900 591 aa23.56■■□□□ 1.36
YIF1A-213ENST00000534374 IFNKQ9P0W0 207 aa23.56■■□□□ 1.36
YIF1A-213ENST00000534374 ZZEF1O43149 2961 aa23.56■■□□□ 1.36
YIF1A-213ENST00000534374 ANKRD11Q6UB99 2663 aaPredicted RBP23.55■■□□□ 1.36
YIF1A-213ENST00000534374 SPTY2D1-AS1A0A0U1RR47 76 aa23.55■■□□□ 1.36
YIF1A-213ENST00000534374 INSIG1O15503 277 aa23.55■■□□□ 1.36
YIF1A-213ENST00000534374 RFPL3O75679 317 aa23.55■■□□□ 1.36
YIF1A-213ENST00000534374 ACADVLP49748 655 aa23.55■■□□□ 1.36
YIF1A-213ENST00000534374 NSUN2Q08J23 767 aaKnown RBP eCLIP23.55■■□□□ 1.36
YIF1A-213ENST00000534374 DNAJC3Q13217 504 aa23.55■■□□□ 1.36
YIF1A-213ENST00000534374 DPYSQ14117 519 aa23.55■■□□□ 1.36
YIF1A-213ENST00000534374 RFTN1Q14699 578 aaPredicted RBP23.55■■□□□ 1.36
YIF1A-213ENST00000534374 DPYSL2Q16555 572 aa23.55■■□□□ 1.36
YIF1A-213ENST00000534374 CCDC157Q569K6 752 aa23.55■■□□□ 1.36
YIF1A-213ENST00000534374 PTAR1Q7Z6K3 402 aaPredicted RBP23.55■■□□□ 1.36
YIF1A-213ENST00000534374 ARHGAP12Q8IWW6 846 aa23.55■■□□□ 1.36
YIF1A-213ENST00000534374 TUBGCP5Q96RT8 1024 aa23.55■■□□□ 1.36
YIF1A-213ENST00000534374 GGT7Q9UJ14 662 aa23.55■■□□□ 1.36
YIF1A-213ENST00000534374 ITM2BQ9Y287 266 aa23.55■■□□□ 1.36
YIF1A-213ENST00000534374 APC2O95996 2303 aa23.54■■□□□ 1.36
YIF1A-213ENST00000534374 TSPAN11A1L157 253 aa23.54■■□□□ 1.36
YIF1A-213ENST00000534374 NEMP2A6NFY4 417 aa23.54■■□□□ 1.36
YIF1A-213ENST00000534374 SDC3O75056 442 aa23.54■■□□□ 1.36
YIF1A-213ENST00000534374 PALMO75781 387 aa23.54■■□□□ 1.36
YIF1A-213ENST00000534374 PIAS2O75928 621 aa23.54■■□□□ 1.36
YIF1A-213ENST00000534374 TM7SF2O76062 418 aa23.54■■□□□ 1.36
YIF1A-213ENST00000534374 TPM3P06753 285 aa23.54■■□□□ 1.36
YIF1A-213ENST00000534374 IL1R2P27930 398 aa23.54■■□□□ 1.36
YIF1A-213ENST00000534374 PFN3P60673 137 aa23.54■■□□□ 1.36
YIF1A-213ENST00000534374 HNRNPKP61978 463 aaKnown RBP eCLIP23.54■■□□□ 1.36
YIF1A-213ENST00000534374 IL10RBQ08334 325 aa23.54■■□□□ 1.36
YIF1A-213ENST00000534374 ELP6Q0PNE2 266 aa23.54■■□□□ 1.36
YIF1A-213ENST00000534374 PROX2Q3B8N5 592 aa23.54■■□□□ 1.36
YIF1A-213ENST00000534374 TMEM52BQ4KMG9 183 aa23.54■■□□□ 1.36
YIF1A-213ENST00000534374 HS1BP3Q53T59 392 aa23.54■■□□□ 1.36
YIF1A-213ENST00000534374 NIPA2Q8N8Q9 360 aa23.54■■□□□ 1.36
YIF1A-213ENST00000534374 C1QTNF7Q9BXJ2 289 aa23.54■■□□□ 1.36
YIF1A-213ENST00000534374 THAP2Q9H0W7 228 aa23.54■■□□□ 1.36
YIF1A-213ENST00000534374 IP6K2Q9UHH9 426 aa23.54■■□□□ 1.36
YIF1A-213ENST00000534374 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.54■■□□□ 1.36
YIF1A-213ENST00000534374 PKD1L2Q7Z442 2459 aa23.54■■□□□ 1.36
YIF1A-213ENST00000534374 A0A087X0T9 212 aa23.53■■□□□ 1.36
YIF1A-213ENST00000534374 SRRM3A6NNA2 597 aaPredicted RBP23.53■■□□□ 1.36
YIF1A-213ENST00000534374 H3BRJ5 948 aa23.53■■□□□ 1.36
YIF1A-213ENST00000534374 TRIM38O00635 465 aa23.53■■□□□ 1.36
YIF1A-213ENST00000534374 TOR1BO14657 336 aa23.53■■□□□ 1.36
YIF1A-213ENST00000534374 SIGLEC6O43699 453 aa23.53■■□□□ 1.36
YIF1A-213ENST00000534374 CSF2P04141 144 aa23.53■■□□□ 1.36
YIF1A-213ENST00000534374 GYPCP04921 128 aa23.53■■□□□ 1.36
YIF1A-213ENST00000534374 CYP1A2P05177 515 aa23.53■■□□□ 1.36
YIF1A-213ENST00000534374 FAM228BP0C875 321 aa23.53■■□□□ 1.36
YIF1A-213ENST00000534374 XPAP23025 273 aaPredicted RBP23.53■■□□□ 1.36
YIF1A-213ENST00000534374 ACP1P24666 158 aa23.53■■□□□ 1.36
YIF1A-213ENST00000534374 FZD2Q14332 565 aa23.53■■□□□ 1.36
YIF1A-213ENST00000534374 UGP2Q16851 508 aa23.53■■□□□ 1.36
YIF1A-213ENST00000534374 ALKBH5Q6P6C2 394 aaKnown RBP23.53■■□□□ 1.36
YIF1A-213ENST00000534374 BRAT1Q6PJG6 821 aa23.53■■□□□ 1.36
YIF1A-213ENST00000534374 POLNQ7Z5Q5 900 aa23.53■■□□□ 1.36
YIF1A-213ENST00000534374 OR4C6Q8NH72 309 aa23.53■■□□□ 1.36
YIF1A-213ENST00000534374 CXorf40AQ8TE69 158 aa23.53■■□□□ 1.36
YIF1A-213ENST00000534374 TEKT4Q8WW24 435 aa23.53■■□□□ 1.36
YIF1A-213ENST00000534374 EXOC2Q96KP1 924 aa23.53■■□□□ 1.36
YIF1A-213ENST00000534374 CCDC86Q9H6F5 360 aaKnown RBP23.53■■□□□ 1.36
YIF1A-213ENST00000534374 IPO11Q9UI26 975 aaKnown RBP23.53■■□□□ 1.36
YIF1A-213ENST00000534374 URB1O60287 2271 aaKnown RBP23.53■■□□□ 1.36
YIF1A-213ENST00000534374 BUB1BO60566 1050 aaPredicted RBP23.52■■□□□ 1.36
YIF1A-213ENST00000534374 MMP20O60882 483 aa23.52■■□□□ 1.36
YIF1A-213ENST00000534374 HNRNPH3P31942 346 aaKnown RBP23.52■■□□□ 1.36
YIF1A-213ENST00000534374 ARL4AP40617 200 aa23.52■■□□□ 1.36
YIF1A-213ENST00000534374 YPEL5P62699 121 aa23.52■■□□□ 1.36
YIF1A-213ENST00000534374 CAMK2BQ13554 666 aa23.52■■□□□ 1.36
YIF1A-213ENST00000534374 NFKBIBQ15653 356 aa23.52■■□□□ 1.36
YIF1A-213ENST00000534374 SRLQ86TD4 932 aa23.52■■□□□ 1.36
YIF1A-213ENST00000534374 PARGQ86W56 976 aa23.52■■□□□ 1.36
YIF1A-213ENST00000534374 PROSER1Q86XN7 944 aa23.52■■□□□ 1.36
YIF1A-213ENST00000534374 NPWQ8N729 165 aa23.52■■□□□ 1.36
YIF1A-213ENST00000534374 TSEN2Q8NCE0 465 aaKnown RBP23.52■■□□□ 1.36
YIF1A-213ENST00000534374 SP110Q9HB58 689 aa23.52■■□□□ 1.36
YIF1A-213ENST00000534374 UCKL1Q9NWZ5 548 aa23.52■■□□□ 1.36
YIF1A-213ENST00000534374 DNAJC28Q9NX36 388 aa23.52■■□□□ 1.36
YIF1A-213ENST00000534374 DKK4Q9UBT3 224 aa23.52■■□□□ 1.36
YIF1A-213ENST00000534374 ZFYVE26Q68DK2 2539 aa23.51■■□□□ 1.35
YIF1A-213ENST00000534374 MYO1FO00160 1098 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms