RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 CCDC185Q8N715 623 aa17.09■□□□□ 0.33
CAPRIN1-216ENST00000534042 CXorf40AQ8TE69 158 aa17.09■□□□□ 0.33
CAPRIN1-216ENST00000534042 FAM172AQ8WUF8 416 aa17.09■□□□□ 0.33
CAPRIN1-216ENST00000534042 CENPIQ92674 756 aaPredicted RBP17.09■□□□□ 0.33
CAPRIN1-216ENST00000534042 NTAN1Q96AB6 310 aa17.09■□□□□ 0.33
CAPRIN1-216ENST00000534042 VOPP1Q96AW1 172 aa17.09■□□□□ 0.33
CAPRIN1-216ENST00000534042 ATXN7L3BQ96GX2 97 aa17.09■□□□□ 0.33
CAPRIN1-216ENST00000534042 BOCQ9BWV1 1114 aa17.09■□□□□ 0.33
CAPRIN1-216ENST00000534042 DPH1Q9BZG8 443 aa17.09■□□□□ 0.33
CAPRIN1-216ENST00000534042 SLC13A1Q9BZW2 595 aa17.09■□□□□ 0.33
CAPRIN1-216ENST00000534042 TTYH3Q9C0H2 523 aa17.09■□□□□ 0.33
CAPRIN1-216ENST00000534042 TCEAL2Q9H3H9 227 aaPredicted RBP17.09■□□□□ 0.33
CAPRIN1-216ENST00000534042 CPNE5Q9HCH3 593 aa17.09■□□□□ 0.33
CAPRIN1-216ENST00000534042 NEU3Q9UQ49 428 aa17.09■□□□□ 0.33
CAPRIN1-216ENST00000534042 ENTPD2Q9Y5L3 495 aa17.09■□□□□ 0.33
CAPRIN1-216ENST00000534042 UNC13CQ8NB66 2214 aa17.09■□□□□ 0.33
CAPRIN1-216ENST00000534042 LMO7DNF2Z398 122 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 ERVH48-1M5A8F1 160 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 TOR1BO14657 336 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 GCATO75600 419 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 IGSF6O95976 241 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 RHDQ02161 417 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 PERM1Q5SV97 790 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 C6orf132Q5T0Z8 1188 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 ARHGAP40Q5TG30 622 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 IGF2-ASQ6U949 168 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 CRTC1Q6UUV9 634 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 SLFN11Q7Z7L1 901 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 ZNF605Q86T29 641 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 ZNF843Q8N446 348 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 CASKIN2Q8WXE0 1202 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 NAT6Q93015 286 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 TBATAQ96M53 351 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 SELENOOQ9BVL4 669 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 NUP62CLQ9H1M0 184 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 VPS16Q9H269 839 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 NLRC4Q9NPP4 1024 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 FAM207AQ9NSI2 230 aaPredicted RBP17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 MGAQ8IWI9 3026 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 LRRK1Q38SD2 2015 aa17.08■□□□□ 0.32
CAPRIN1-216ENST00000534042 COL27A1Q8IZC6 1860 aaPredicted RBP17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 CAPN8A6NHC0 703 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 TCEA3O75764 348 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 ZIC2O95409 532 aaPredicted RBP17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 TPM2P07951 284 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 GPD1P21695 349 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 XPAP23025 273 aaPredicted RBP17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 EPHB2P29323 1055 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 RFC1P35251 1148 aaPredicted RBP17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 EIF4A3P38919 411 aaKnown RBP17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 NSFP46459 744 aaKnown RBP17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 KLK7P49862 253 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 RHOAP61586 193 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 PPARDQ03181 441 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 CFHR1Q03591 330 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 PTP4A2Q12974 167 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 KLHL40Q2TBA0 621 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 INO80DQ53TQ3 878 aaPredicted RBP17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 FKBP15Q5T1M5 1219 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 PCSK4Q6UW60 755 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 MACC1Q6ZN28 852 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 SLC35F3Q8IY50 421 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 RTL3Q8N8U3 475 aaKnown RBP17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 WDR48Q8TAF3 677 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 SLC46A1Q96NT5 459 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 EPAS1Q99814 870 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 WRAP53Q9BUR4 548 aaKnown RBP17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 LRRC61Q9BV99 259 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 MBNL1Q9NR56 388 aaKnown RBP17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 ADAM22Q9P0K1 906 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 DKK3Q9UBP4 350 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 DOLKQ9UPQ8 538 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 MFHAS1Q9Y4C4 1052 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 PCDHGA8Q9Y5G5 932 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 AHCTF1Q8WYP5 2266 aa17.07■□□□□ 0.32
CAPRIN1-216ENST00000534042 A0A1W2PNU3 283 aaPredicted RBP17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 YY2O15391 372 aa17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 UNGP13051 313 aaPredicted RBP17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 TIMP2P16035 220 aa17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 ITIH2P19823 946 aa17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 STAT1P42224 750 aa17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 BLKP51451 505 aa17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 GSCP56915 257 aaPredicted RBP17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 JAM2P57087 298 aa17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 YBEYP58557 167 aaPredicted RBP17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 EFHC2Q5JST6 749 aa17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 ESRP1Q6NXG1 681 aaKnown RBP17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 SCYL2Q6P3W7 929 aa17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 WDR59Q6PJI9 974 aa17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 PYROXD2Q8N2H3 581 aa17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 TP53I13Q8NBR0 393 aaPredicted RBP17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 NETO2Q8NC67 525 aa17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 CCDC97Q96F63 343 aaPredicted RBP17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 PCDHB18PQ96TA0 734 aa17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 CLPBQ9H078 707 aa17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 KLC2Q9H0B6 622 aa17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 NOL6Q9H6R4 1146 aaKnown RBP17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 SYNDIG1Q9H7V2 258 aa17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 CHMP5Q9NZZ3 219 aa17.06■□□□□ 0.32
CAPRIN1-216ENST00000534042 PNMA8BQ9ULN7 279 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms