RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 EDEM3Q9BZQ6 932 aa9.38□□□□□ -0.91
PACS1-214ENST00000533811 ANLNQ9NQW6 1124 aa9.38□□□□□ -0.91
PACS1-214ENST00000533811 MBNL1Q9NR56 388 aaKnown RBP9.38□□□□□ -0.91
PACS1-214ENST00000533811 ACSL6Q9UKU0 697 aa9.38□□□□□ -0.91
PACS1-214ENST00000533811 COQ6Q9Y2Z9 468 aa9.38□□□□□ -0.91
PACS1-214ENST00000533811 ARHGEF17Q96PE2 2063 aaPredicted RBP9.38□□□□□ -0.91
PACS1-214ENST00000533811 ILVBLA1L0T0 632 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 DRGXA6NNA5 263 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 PSMA7O14818 248 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 PMM2O15305 246 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 ZMPSTE24O75844 475 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 RASGRP1O95267 797 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 SMC2O95347 1197 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 ERBB2P04626 1255 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 ITIH2P19823 946 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 CR2P20023 1033 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 ATP1A2P50993 1020 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 HK3P52790 923 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 SLC6A3Q01959 620 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 GNA12Q03113 381 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 DEUP1Q05D60 604 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 SLC20A2Q08357 652 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 KCNAB2Q13303 367 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 ALG11Q2TAA5 492 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 KLHL40Q2TBA0 621 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 MAP9Q49MG5 647 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 C4orf17Q53FE4 359 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 BRMS1LQ5PSV4 323 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 OTUD1Q5VV17 481 aaPredicted RBP9.37□□□□□ -0.91
PACS1-214ENST00000533811 GJB7Q6PEY0 223 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 BORAQ6PGQ7 559 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 OLFML1Q6UWY5 402 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 LEKR1Q6ZMV7 388 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 TTC7BQ86TV6 843 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 ZNF683Q8IZ20 524 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 OR6C4Q8NGE1 309 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 SMARCE1Q969G3 411 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 CEP63Q96MT8 703 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 TBCBQ99426 244 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 CMKLR1Q99788 373 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 ARHGEF38Q9NXL2 777 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.37□□□□□ -0.91
PACS1-214ENST00000533811 AKAP7Q9P0M2 348 aaPredicted RBP9.37□□□□□ -0.91
PACS1-214ENST00000533811 KLQ9UEF7 1012 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 STAP1Q9ULZ2 295 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 CNTN6Q9UQ52 1028 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 RNF215Q9Y6U7 377 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 LRRK2Q5S007 2527 aa9.37□□□□□ -0.91
PACS1-214ENST00000533811 A0A1W2PQ27 194 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 A0A1W2PQ64 194 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 A0A1W2PQC6 194 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 B4DGG1 531 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 C9orf172C9J069 976 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 I6L893 689 aaPredicted RBP9.36□□□□□ -0.91
PACS1-214ENST00000533811 PCCBP05166 539 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 XPAP23025 273 aaPredicted RBP9.36□□□□□ -0.91
PACS1-214ENST00000533811 HTR1BP28222 390 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 ACVRL1P37023 503 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 CXCR3P49682 368 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 POLE2P56282 527 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 SRP54P61011 504 aaKnown RBP9.36□□□□□ -0.91
PACS1-214ENST00000533811 SNRPD1P62314 119 aaKnown RBP9.36□□□□□ -0.91
PACS1-214ENST00000533811 MORC3Q14149 939 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 ARHGEF7Q14155 803 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 NCAPHQ15003 741 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 POLD3Q15054 466 aaPredicted RBP9.36□□□□□ -0.91
PACS1-214ENST00000533811 AMZ1Q400G9 498 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 COBLL1Q53SF7 1204 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 ATXN7L2Q5T6C5 722 aaPredicted RBP9.36□□□□□ -0.91
PACS1-214ENST00000533811 TMEM164Q5U3C3 297 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 LVRNQ6Q4G3 990 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 NYAP1Q6ZVC0 841 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 SLC26A9Q7LBE3 791 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 TAF8Q7Z7C8 310 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 ZNF354CQ86Y25 554 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 WDTC1Q8N5D0 677 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 IL22RA1Q8N6P7 574 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 TP53I13Q8NBR0 393 aaPredicted RBP9.36□□□□□ -0.91
PACS1-214ENST00000533811 FAM46DQ8NEK8 389 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 NPY6RQ99463 290 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 CRACR2AQ9BSW2 395 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 ZYG11BQ9C0D3 744 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 ADNPQ9H2P0 1102 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 GDPD2Q9HCC8 539 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 MAN2B2Q9Y2E5 1009 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 OR1A2Q9Y585 309 aa9.36□□□□□ -0.91
PACS1-214ENST00000533811 ICE1Q9Y2F5 2266 aa9.35□□□□□ -0.91
PACS1-214ENST00000533811 FLNCQ14315 2725 aa9.35□□□□□ -0.91
PACS1-214ENST00000533811 SPTBN1Q01082 2364 aaKnown RBP9.35□□□□□ -0.91
PACS1-214ENST00000533811 BLACEA4D250 179 aa9.35□□□□□ -0.91
PACS1-214ENST00000533811 BECN2A8MW95 431 aa9.35□□□□□ -0.91
PACS1-214ENST00000533811 STMND1H3BQB6 276 aa9.35□□□□□ -0.91
PACS1-214ENST00000533811 AREL1O15033 823 aa9.35□□□□□ -0.91
PACS1-214ENST00000533811 GSRP00390 522 aa9.35□□□□□ -0.91
PACS1-214ENST00000533811 TNFP01375 233 aa9.35□□□□□ -0.91
PACS1-214ENST00000533811 CD82P27701 267 aa9.35□□□□□ -0.91
PACS1-214ENST00000533811 CCR10P46092 362 aa9.35□□□□□ -0.91
PACS1-214ENST00000533811 SNX16P57768 344 aa9.35□□□□□ -0.91
PACS1-214ENST00000533811 FOXK1P85037 733 aa9.35□□□□□ -0.91
PACS1-214ENST00000533811 ZFP36L1Q07352 338 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms