RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 ZNF662Q6ZS27 426 aa11.36□□□□□ -0.59
AMBRA1-211ENST00000533727 XYLT1Q86Y38 959 aa11.36□□□□□ -0.59
AMBRA1-211ENST00000533727 AVL9Q8NBF6 648 aa11.36□□□□□ -0.59
AMBRA1-211ENST00000533727 SLC4A11Q8NBS3 891 aa11.36□□□□□ -0.59
AMBRA1-211ENST00000533727 POF1BQ8WVV4 589 aa11.36□□□□□ -0.59
AMBRA1-211ENST00000533727 JADE3Q92613 823 aa11.36□□□□□ -0.59
AMBRA1-211ENST00000533727 PRCCQ92733 491 aaPredicted RBP11.36□□□□□ -0.59
AMBRA1-211ENST00000533727 C17orf80Q9BSJ5 609 aa11.36□□□□□ -0.59
AMBRA1-211ENST00000533727 GDAP2Q9NXN4 497 aa11.36□□□□□ -0.59
AMBRA1-211ENST00000533727 ARL15Q9NXU5 204 aa11.36□□□□□ -0.59
AMBRA1-211ENST00000533727 ANKDD1BA6NHY2 528 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 NCF1BA6NI72 391 aaPredicted RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 NCF1CA8MVU1 366 aaPredicted RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 NCF1P14598 390 aaPredicted RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 PSMC3P17980 439 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 PSMB4P28070 264 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 ATP6V1E1P36543 226 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 SLC11A1P49279 550 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 CDC16Q13042 620 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 GNA13Q14344 377 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 ATAD3BQ5T9A4 648 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 ARID3BQ8IVW6 561 aaPredicted RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 CRYBG2Q8N1P7 616 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 ZNF786Q8N393 782 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 EIF1ADQ8N9N8 165 aaKnown RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 ZNF461Q8TAF7 563 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 STAG3L4Q8TBR4 150 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 SEMA4DQ92854 862 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 PLEKHA8Q96JA3 519 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 ANKZF1Q9H8Y5 726 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 PCDH18Q9HCL0 1135 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 KLHL28Q9NXS3 571 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 DMGDHQ9UI17 866 aaKnown RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 COQ4Q9Y3A0 265 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 CHI3L1P36222 383 aaPredicted RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 RAB14P61106 215 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 ILF3Q12906 894 aaKnown RBP eCLIP11.35□□□□□ -0.598e-7■■■□□ 17.4
AMBRA1-211ENST00000533727 SPDYCQ5MJ68 293 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 LPCAT2Q7L5N7 544 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 GPSM1Q86YR5 675 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 PTCD2Q8WV60 388 aaKnown RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 BAP1Q92560 729 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 KREMEN1Q96MU8 473 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 KLF6Q99612 283 aaPredicted RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 GLOD4Q9HC38 313 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 MCM8Q9UJA3 840 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 RGPD1P0DJD0 1748 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 hCG_1818297A0A087WSY0 165 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 MYBPHLA2RUH7 354 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 FKBP6O75344 327 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 TIMP1P01033 207 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 CST3P01034 146 aaPredicted RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 CCNCP24863 283 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 RPA3P35244 121 aaPredicted RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 ABL2P42684 1182 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 NRIP1P48552 1158 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 SEL1L3Q68CR1 1132 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 ZCCHC8Q6NZY4 707 aaKnown RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 CERS6Q6ZMG9 384 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 SCUBE1Q8IWY4 988 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 FUKQ8N0W3 1084 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 ZCCHC9Q8N567 271 aaKnown RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 ZNF513Q8N8E2 541 aaPredicted RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 FBXO25Q8TCJ0 367 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 BPIFB1Q8TDL5 484 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 SH3RF2Q8TEC5 729 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 TADA1Q96BN2 335 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 IGSF21Q96ID5 467 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 MAGEB18Q96M61 343 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 RXFP1Q9HBX9 757 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 SCN3BQ9NY72 215 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 RPS6KB2Q9UBS0 482 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 VTI1BQ9UEU0 232 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 COL22A1Q8NFW1 1626 aaPredicted RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 C5orf60A6NFR6 353 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 RASSF9O75901 435 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 SLC25A14O95258 325 aaPredicted RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 FKBP9O95302 570 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 GJB6O95452 261 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 RPL17P18621 184 aaKnown RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 IDSP22304 550 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 PSMA3P25788 255 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 FMO4P31512 558 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 RPL3P39023 403 aaKnown RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 GUCA1AP43080 201 aaPredicted RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 MTM1Q13496 603 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 WASHC2DQ5SRD0 308 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 FKBP9P1Q75LS8 142 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 ADAMTSL2Q86TH1 951 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 BBS7Q8IWZ6 715 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 TERB1Q8NA31 727 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 BADQ92934 168 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 CAVIN3Q969G5 261 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 FAM162AQ96A26 154 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 RERGQ96A58 199 aaPredicted RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 FAM192AQ9GZU8 254 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 PNPLA8Q9NP80 782 aa11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 CAB39Q9Y376 341 aaPredicted RBP11.35□□□□□ -0.59
AMBRA1-211ENST00000533727 SGTAO43765 313 aa11.34□□□□□ -0.59
AMBRA1-211ENST00000533727 ALBP02768 609 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms