RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 ITGB6P18564 788 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 ADORA2AP29274 412 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 PKNOX1P55347 436 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 IRF8Q02556 426 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 ACVR2BQ13705 512 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 PFKFB4Q16877 469 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 ALFQ53S48 1182 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 ZNF618Q5T7W0 954 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 NEK5Q6P3R8 708 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 MACC1Q6ZN28 852 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 KRT74Q7RTS7 529 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 ZNF655Q8N720 491 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-236ENST00000533667 RNF148Q8N7C7 305 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 OR7A2PQ8NGA2 310 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 KAT5Q92993 513 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 CD101Q93033 1021 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 TCF12Q99081 682 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 HSD17B14Q9BPX1 270 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 UNKQ9C0B0 810 aaKnown RBP7.07□□□□□ -1.28
CTNND1-236ENST00000533667 ZYG11BQ9C0D3 744 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 MTFR1LQ9H019 292 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 PLGRKTQ9HBL7 147 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 PRKAG3Q9UGI9 489 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 GTF2A1LQ9UNN4 478 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 ANGPT4Q9Y264 503 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 DISP2A7MBM2 1401 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 FGRP09769 529 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 ALOX12P18054 663 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 BDNFP23560 247 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 CCNCP24863 283 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 HIRAP54198 1017 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-236ENST00000533667 PRKG2Q13237 762 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 RIPK1Q13546 671 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 RGS21Q2M5E4 152 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 SLC39A12Q504Y0 691 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 ZNF57Q68EA5 555 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-236ENST00000533667 CCDC149Q6ZUS6 474 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.07□□□□□ -1.28
CTNND1-236ENST00000533667 PCDH20Q8N6Y1 951 aaKnown RBP7.07□□□□□ -1.28
CTNND1-236ENST00000533667 ZSCAN18Q8TBC5 510 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-236ENST00000533667 P2RX7Q99572 595 aaKnown RBP7.07□□□□□ -1.28
CTNND1-236ENST00000533667 MLPHQ9BV36 600 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-236ENST00000533667 FAIM2Q9BWQ8 316 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 GRIP2Q9C0E4 1043 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.07□□□□□ -1.28
CTNND1-236ENST00000533667 MUC13Q9H3R2 512 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 RERGLQ9H628 205 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 TRIM39Q9HCM9 518 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 SEMA4BQ9NPR2 832 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-236ENST00000533667 PRDM8Q9NQV8 689 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 ZMYM5Q9UJ78 669 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 PPLO60437 1756 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 PTGES3LE9PB15 166 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 MTRF1O75570 445 aaKnown RBP7.07□□□□□ -1.28
CTNND1-236ENST00000533667 PCDH8O95206 1070 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 ACADMP11310 421 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 NFKB1P19838 968 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 GSTT1P30711 240 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 GSTM5P46439 218 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 SNRPD1P62314 119 aaKnown RBP7.07□□□□□ -1.28
CTNND1-236ENST00000533667 DPYSQ14117 519 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 MAPKAPK3Q16644 382 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 BRMS1LQ5PSV4 323 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 CATSPERGQ6ZRH7 1159 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 KIAA0408Q6ZU52 694 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 EIF3MQ7L2H7 374 aaKnown RBP7.07□□□□□ -1.28
CTNND1-236ENST00000533667 SLC41A1Q8IVJ1 513 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 CLYBLQ8N0X4 340 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 CACTIN-AS1Q8N1I8 211 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 HELQQ8TDG4 1101 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 ANKRD49Q8WVL7 239 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 LENG1Q96BZ8 264 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-236ENST00000533667 RTKNQ9BST9 563 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 NFKBIZQ9BYH8 718 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 KLHL31Q9H511 634 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 CYLDQ9NQC7 956 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 CLN6Q9NWW5 311 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 BTBD3Q9Y2F9 522 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 MFHAS1Q9Y4C4 1052 aa7.07□□□□□ -1.28
CTNND1-236ENST00000533667 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-236ENST00000533667 ANKDD1BA6NHY2 528 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 ULK1O75385 1050 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 GRIA3P42263 894 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 MATKP42679 507 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 PLK1P53350 603 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 RHBDL3P58872 404 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 SLC25A3Q00325 362 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 ENPEPQ07075 957 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 ACOX1Q15067 660 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 SETMARQ53H47 684 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-236ENST00000533667 TMEM63BQ5T3F8 832 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 PMF1Q6P1K2 205 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 CYP20A1Q6UW02 462 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 GPRIN3Q6ZVF9 776 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 IQCKQ8N0W5 287 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 ADAM32Q8TC27 787 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 HOPXQ9BPY8 73 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-236ENST00000533667 ADI1Q9BV57 179 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 TMEM109Q9BVC6 243 aa7.06□□□□□ -1.28
CTNND1-236ENST00000533667 SEMA6AQ9H2E6 1030 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms