RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 GABRG2P18507 467 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 SERPINA4P29622 427 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 ADCY8P40145 1251 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 PSMD8P48556 350 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 METAP1P53582 386 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 GEMP55040 296 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 WNT3AP56704 352 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 SATB1Q01826 763 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 MPP3Q13368 585 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 SPARCL1Q14515 664 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 POM121L1PQ3SYA9 428 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 SYCP2LQ5T4T6 812 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 ZNF776Q68DI1 518 aaPredicted RBP12.03□□□□□ -0.48
COMMD9-208ENST00000533643 DUPD1Q68J44 220 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 KCTD11Q693B1 232 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 C8orf74Q6P047 294 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 BMP8AQ7Z5Y6 402 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 TMPRSS6Q8IU80 811 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 CCHCR1Q8TD31 782 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 MRGPRX2Q96LB1 330 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 KLHL32Q96NJ5 620 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 PPP1R2P1Q96PQ5 205 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 ERP44Q9BS26 406 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 OSBPL1AQ9BXW6 950 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 POLMQ9NP87 494 aaPredicted RBP12.03□□□□□ -0.48
COMMD9-208ENST00000533643 VPS45Q9NRW7 570 aa12.03□□□□□ -0.48
COMMD9-208ENST00000533643 AAR2Q9Y312 384 aaKnown RBP12.03□□□□□ -0.48
COMMD9-208ENST00000533643 TSPAN11A1L157 253 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 BHMG1C9JSJ3 638 aaPredicted RBP12.02□□□□□ -0.49
COMMD9-208ENST00000533643 KPNA3O00505 521 aaPredicted RBP12.02□□□□□ -0.49
COMMD9-208ENST00000533643 RIOK3O14730 519 aaKnown RBP12.02□□□□□ -0.49
COMMD9-208ENST00000533643 MID1O15344 667 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 PSMD3O43242 534 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 FZD6O60353 706 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 SOCS5O75159 536 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 PGLSO95336 258 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 SLU7O95391 586 aaKnown RBP12.02□□□□□ -0.49
COMMD9-208ENST00000533643 AP2A1O95782 977 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 ADH1BP00325 375 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 TIMP2P16035 220 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 NDUFV2P19404 249 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 SLC8A1P32418 973 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 ADRA1AP35348 466 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 MAGEA6P43360 314 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 RPL21P46778 160 aaKnown RBP12.02□□□□□ -0.49
COMMD9-208ENST00000533643 CXCL12P48061 93 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 TERF1P54274 439 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 BASP1P80723 227 aaKnown RBP12.02□□□□□ -0.49
COMMD9-208ENST00000533643 SLC7A5Q01650 507 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 OLIG2Q13516 323 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 KCNJ11Q14654 390 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 CST6Q15828 149 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 PCSK7Q16549 785 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 GLE1Q53GS7 698 aaKnown RBP12.02□□□□□ -0.49
COMMD9-208ENST00000533643 ZNF805Q5CZA5 627 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 FAM46CQ5VWP2 391 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 ANKRD22Q5VYY1 191 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 KDELC2Q7Z4H8 507 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 ZSWIM9Q86XI8 627 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 CACUL1Q86Y37 369 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 FBXL6Q8N531 539 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 PDCD7Q8N8D1 485 aaKnown RBP12.02□□□□□ -0.49
COMMD9-208ENST00000533643 TMEM105Q8N8V8 129 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 IPMKQ8NFU5 416 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 HCAR2Q8TDS4 363 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 CPT1BQ92523 772 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 ARRDC3Q96B67 414 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 LRRC45Q96CN5 670 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 ECHDC3Q96DC8 303 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 SIPA1Q96FS4 1042 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 MRGPRX1Q96LB2 322 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 HHIPQ96QV1 700 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 TRIB3Q96RU7 358 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 HINFPQ9BQA5 517 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 FICDQ9BVA6 458 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 TDRD1Q9BXT4 1180 aaKnown RBP12.02□□□□□ -0.49
COMMD9-208ENST00000533643 TRIM31Q9BZY9 425 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 DKK3Q9UBP4 350 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 CHKBQ9Y259 395 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 CKAP5Q14008 2032 aa12.02□□□□□ -0.49
COMMD9-208ENST00000533643 LOC285095A0A1B0GVY8 99 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 TCRBV7S3A2A0A539 114 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 GOLGA6CA6NDK9 693 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 GOLGA6BA6NDN3 693 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 FAM86C2PA6NEL3 165 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 C16orf96A6NNT2 1141 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 EFCAB8A8MWE9 144 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 E7EVH7 732 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 C1QTNF3-AMACRE9PGA6 284 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 PLK4O00444 970 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 DNALI1O14645 258 aaPredicted RBP12.01□□□□□ -0.49
COMMD9-208ENST00000533643 SUN1O94901 812 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 PAPSS2O95340 614 aaPredicted RBP12.01□□□□□ -0.49
COMMD9-208ENST00000533643 APBB3O95704 486 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 AGTP01019 485 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 EPOP01588 193 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 APRTP07741 180 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 PDHA1P08559 390 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 GOLGA6DP0CG33 693 aa12.01□□□□□ -0.49
COMMD9-208ENST00000533643 C5AR1P21730 350 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms