RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 C21orf59P57076 290 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 GALNT3Q14435 633 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 PTPRNQ16849 979 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 AASDHQ4L235 1098 aaPredicted RBP12.34□□□□□ -0.43
BDNF-218ENST00000533246 NEK5Q6P3R8 708 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 DENND1CQ8IV53 801 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 PTGR2Q8N8N7 351 aaPredicted RBP12.34□□□□□ -0.43
BDNF-218ENST00000533246 ZNF555Q8NEP9 628 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 DNAJB14Q8TBM8 379 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 CDH9Q9ULB4 789 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 MANSC4A6NHS7 340 aaPredicted RBP12.34□□□□□ -0.43
BDNF-218ENST00000533246 BPGMP07738 259 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 MPSTP25325 297 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 CRABP2P29373 138 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 DUSP4Q13115 394 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 OLIG2Q13516 323 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 SYPL2Q5VXT5 272 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 AMIGO2Q86SJ2 522 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 FAM126BQ8IXS8 530 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 MICU2Q8IYU8 434 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 RBM15BQ8NDT2 890 aaKnown RBP12.34□□□□□ -0.43
BDNF-218ENST00000533246 NAT14Q8WUY8 206 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 FBXL18Q96ME1 805 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 RNF145Q96MT1 663 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 GMLQ99445 158 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 NOL6Q9H6R4 1146 aaKnown RBP12.34□□□□□ -0.43
BDNF-218ENST00000533246 UBA2Q9UBT2 640 aaPredicted RBP12.34□□□□□ -0.43
BDNF-218ENST00000533246 PCDHGC3Q9UN70 934 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 NDUFAF1Q9Y375 327 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 CITO14578 2027 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 NUMA1Q14980 2115 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 SNTNA6NMZ2 147 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.34□□□□□ -0.43
BDNF-218ENST00000533246 FFAR3O14843 346 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 HDAC3O15379 428 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 GPR42O15529 346 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 SPATA31D3P0C874 917 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 CDK7P50613 346 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 HSPA14Q0VDF9 509 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 TRAF2Q12933 501 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 TCEA2Q15560 299 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 TRAF7Q6Q0C0 670 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 SPATA31D4Q6ZUB0 917 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 ARRDC4Q8NCT1 418 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 BHLHE22Q8NFJ8 381 aaPredicted RBP12.34□□□□□ -0.43
BDNF-218ENST00000533246 FNIP1Q8TF40 1166 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 FIG4Q92562 907 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 FAR2Q96K12 515 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 HBEGFQ99075 208 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 AGAP2Q99490 1192 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 PRKD2Q9BZL6 878 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 GRIP2Q9C0E4 1043 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 POLR1EQ9GZS1 481 aaKnown RBP12.34□□□□□ -0.43
BDNF-218ENST00000533246 ELOVL6Q9H5J4 265 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 ZNHIT2Q9UHR6 403 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 CHKBQ9Y259 395 aa12.34□□□□□ -0.43
BDNF-218ENST00000533246 MTA2O94776 668 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 C22orf31O95567 290 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 FAM163BP0C2L3 166 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 ENDOUP21128 410 aaKnown RBP12.33□□□□□ -0.44
BDNF-218ENST00000533246 HPCAP84074 193 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 BTG3Q14201 252 aaPredicted RBP12.33□□□□□ -0.44
BDNF-218ENST00000533246 SOWAHAQ2M3V2 549 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 MPP5Q8N3R9 675 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 MTMR14Q8NCE2 650 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 PPP2R3CQ969Q6 453 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 PCED1BQ96HM7 432 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 RHOBTB2Q9BYZ6 727 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 DTLQ9NZJ0 730 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 PADI3Q9ULW8 664 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 C9IYK1 514 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 OXSR1O95747 527 aaPredicted RBP12.33□□□□□ -0.44
BDNF-218ENST00000533246 PRKAR2AP13861 404 aaKnown RBP12.33□□□□□ -0.44
BDNF-218ENST00000533246 EPB42P16452 691 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 HADHBP55084 474 aaKnown RBP12.33□□□□□ -0.44
BDNF-218ENST00000533246 GJA9P57773 515 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 ZNF280AP59817 542 aaPredicted RBP12.33□□□□□ -0.44
BDNF-218ENST00000533246 CYP51A1Q16850 503 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 MSS51Q4VC12 460 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 TEX44Q53QW1 395 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 ZNF567Q8N184 647 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 SCAMP5Q8TAC9 235 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 DGCR14Q96DF8 476 aaKnown RBP12.33□□□□□ -0.44
BDNF-218ENST00000533246 CAMKK2Q96RR4 588 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 HGH1Q9BTY7 390 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 DENND2DQ9H6A0 471 aaPredicted RBP12.33□□□□□ -0.44
BDNF-218ENST00000533246 MARCH7Q9H992 704 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 TMEM216Q9P0N5 145 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 VPS9D1Q9Y2B5 631 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 SLC15A5A6NIM6 579 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 SRRM3A6NNA2 597 aaPredicted RBP12.33□□□□□ -0.44
BDNF-218ENST00000533246 GSC2O15499 205 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 TLR5O60602 858 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 LYNP07948 512 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 CSH1P0DML2 217 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 CSH2P0DML3 217 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 POU1F1P28069 291 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 GRK4P32298 578 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 ATP5C1P36542 298 aaKnown RBP12.33□□□□□ -0.44
BDNF-218ENST00000533246 BFSP2Q13515 415 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms