RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 CDKN3Q16667 212 aa11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 POM121L1PQ3SYA9 428 aa11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 MEI1Q5TIA1 1274 aa11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 RNF219Q5W0B1 726 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 CCDC117Q8IWD4 279 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 STK40Q8N2I9 435 aa11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 TMEM145Q8NBT3 493 aa11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 JOSD2Q8TAC2 188 aa11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 RNF139Q8WU17 664 aa11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 ARRDC3Q96B67 414 aa11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 LMLNQ96KR4 655 aa11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 ADNPQ9H2P0 1102 aa11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 ACSL6Q9UKU0 697 aa11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 AMFRQ9UKV5 643 aa11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 HYOU1Q9Y4L1 999 aa11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 ALG6Q9Y672 507 aa11.54□□□□□ -0.56
TRAPPC4-213ENST00000533149 TYW5A2RUC4 315 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 BLACEA4D250 179 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 PMS2P1A4D2B8 440 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 NOBOXO60393 691 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 URI1O94763 535 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 PROSCO94903 275 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 COMTP21964 271 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 SLC5A2P31639 672 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 RFC1P35251 1148 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 DRD3P35462 400 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 NNMTP40261 264 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 SLC11A2P49281 568 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 SGSHP51688 502 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 TKTL1P51854 596 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 RNASE9P60153 205 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 HNRNPKP61978 463 aaKnown RBP eCLIP11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 EIF3IQ13347 325 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 RPS6KA1Q15418 735 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 FAM102AQ5T9C2 384 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 PIK3R6Q5UE93 754 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 FAM46CQ5VWP2 391 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 PAPD7Q5XG87 772 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 C11orf63Q6NUN7 778 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 OLFML1Q6UWY5 402 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 EFL1Q7Z2Z2 1120 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 PEX26Q7Z412 305 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 DSG4Q86SJ6 1040 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 NT5DC3Q86UY8 548 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 CPNE8Q86YQ8 564 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 ZDHHC17Q8IUH5 632 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 FAM174AQ8TBP5 190 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 NDRG1Q92597 394 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 MCEEQ96PE7 176 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 TLR10Q9BXR5 811 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 CALN1Q9BXU9 219 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 EPN3Q9H201 632 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 METTL5Q9NRN9 209 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 IP6K2Q9UHH9 426 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 TMEM59LQ9UK28 342 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 CA5BQ9Y2D0 317 aa11.53□□□□□ -0.56
TRAPPC4-213ENST00000533149 EME2A4GXA9 379 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 PLD2O14939 933 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 FBXO21O94952 628 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 ZBED1O96006 694 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 LIPCP11150 499 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 SCNN1AP37088 669 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 CASRP41180 1078 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 ECT2LQ008S8 904 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 OGDHQ02218 1023 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 ADIGQ0VDE8 80 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 CDH18Q13634 790 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 TAF5Q15542 800 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 PITRM1Q5JRX3 1037 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 RAB41Q5JT25 222 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 EFHC1Q5JVL4 640 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 MANEAQ5SRI9 462 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 PM20D1Q6GTS8 502 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 GUSBP11Q6P575 273 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 RFWD3Q6PCD5 774 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 DCP2Q8IU60 420 aaKnown RBP11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 UNC45BQ8IWX7 931 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 SIX6OS1Q8N1H7 587 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 EMC1Q8N766 993 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 HJURPQ8NCD3 748 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 CLEC4CQ8WTT0 213 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 RXFP2Q8WXD0 754 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 PTPRN2Q92932 1015 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 LIN37Q96GY3 246 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 DDX50Q9BQ39 737 aaKnown RBP11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 ULBP1Q9BZM6 244 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 PREBQ9HCU5 417 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 DNAJC28Q9NX36 388 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 STIM2Q9P246 746 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 SFMBT1Q9UHJ3 866 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 LCMT1Q9UIC8 334 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 SLCO3A1Q9UIG8 710 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 INTS6Q9UL03 887 aaKnown RBP11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 PCDHGA4Q9Y5G9 962 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 CSNK1G3Q9Y6M4 447 aa11.52□□□□□ -0.57
TRAPPC4-213ENST00000533149 H3BM21 787 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 TMX2-CTNND1H3BSU7 103 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 SLC31A1O15431 190 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 SPOPO43791 374 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 GRAP2O75791 330 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms