RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 LRRC39Q96DD0 335 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 DHRS4Q9BTZ2 278 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 PSMC3IPQ9P2W1 217 aaPredicted RBP18.72■□□□□ 0.59
SMPD1-208ENST00000533123 SLC24A2Q9UI40 661 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 FAM50BQ9Y247 325 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 SLC27A6Q9Y2P4 619 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 FCF1Q9Y324 198 aaKnown RBP18.72■□□□□ 0.59
SMPD1-208ENST00000533123 MIA3Q5JRA6 1907 aa18.72■□□□□ 0.59
SMPD1-208ENST00000533123 TICRRQ7Z2Z1 1910 aa18.71■□□□□ 0.59
SMPD1-208ENST00000533123 AP2A1O95782 977 aa18.71■□□□□ 0.59
SMPD1-208ENST00000533123 PUS10Q3MIT2 529 aaKnown RBP18.71■□□□□ 0.59
SMPD1-208ENST00000533123 KCTD11Q693B1 232 aa18.71■□□□□ 0.59
SMPD1-208ENST00000533123 CASC4Q6P4E1 433 aa18.71■□□□□ 0.59
SMPD1-208ENST00000533123 NXPE3Q969Y0 559 aa18.71■□□□□ 0.59
SMPD1-208ENST00000533123 OXNAD1Q96HP4 312 aaPredicted RBP18.71■□□□□ 0.59
SMPD1-208ENST00000533123 EXOC2Q96KP1 924 aa18.71■□□□□ 0.59
SMPD1-208ENST00000533123 CINPQ9BW66 212 aaPredicted RBP18.71■□□□□ 0.59
SMPD1-208ENST00000533123 CIPCQ9C0C6 399 aa18.71■□□□□ 0.59
SMPD1-208ENST00000533123 CNOT10Q9H9A5 744 aaKnown RBP18.71■□□□□ 0.59
SMPD1-208ENST00000533123 GLOD4Q9HC38 313 aa18.71■□□□□ 0.59
SMPD1-208ENST00000533123 SMAD6O43541 496 aaKnown RBP18.7■□□□□ 0.58
SMPD1-208ENST00000533123 GJB3O75712 270 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 TMCC1O94876 653 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 C1QAP02745 245 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 MLNP12872 115 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 POLR2EP19388 210 aaKnown RBP18.7■□□□□ 0.58
SMPD1-208ENST00000533123 DMC1Q14565 340 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 RFTN1Q14699 578 aaPredicted RBP18.7■□□□□ 0.58
SMPD1-208ENST00000533123 INO80DQ53TQ3 878 aaPredicted RBP18.7■□□□□ 0.58
SMPD1-208ENST00000533123 GRAMD4Q6IC98 578 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 SFTPA1Q8IWL2 248 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 SPATA22Q8NHS9 363 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 CYB5D2Q8WUJ1 264 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 DCAKDQ8WVC6 231 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 STAMBPL1Q96FJ0 436 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 PSKH2Q96QS6 385 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 CYTH2Q99418 400 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 APOL2Q9BQE5 337 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 SYBUQ9NX95 663 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 SEPT3Q9UH03 358 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 PRRT4C9JH25 899 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 SPAG6O75602 509 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 MAGEA9P43362 315 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 SERPINH1P50454 418 aaKnown RBP18.7■□□□□ 0.58
SMPD1-208ENST00000533123 ECT2LQ008S8 904 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 TRMT10BQ6PF06 316 aaKnown RBP18.7■□□□□ 0.58
SMPD1-208ENST00000533123 RNF135Q8IUD6 432 aa18.7■□□□□ 0.58
SMPD1-208ENST00000533123 TMEM120BA0PK00 339 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 SDR42E2A6NKP2 422 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 CXorf49A8MYA2 514 aaPredicted RBP18.69■□□□□ 0.58
SMPD1-208ENST00000533123 NARSO43776 548 aaKnown RBP18.69■□□□□ 0.58
SMPD1-208ENST00000533123 MT-CYBP00156 380 aaPredicted RBP18.69■□□□□ 0.58
SMPD1-208ENST00000533123 BRAFP15056 766 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 STX2P32856 288 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 RGRP47804 291 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 TRABD2AQ86V40 505 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 BBS5Q8N3I7 341 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 PHTF2Q8N3S3 785 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 TTC17Q96AE7 1141 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 FBRSL1Q9HCM7 1045 aaKnown RBP18.69■□□□□ 0.58
SMPD1-208ENST00000533123 SMYD2Q9NRG4 433 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 FETUBQ9UGM5 382 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 SLCO3A1Q9UIG8 710 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 SUN1O94901 812 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 KRT15P19012 456 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 MSH2P43246 934 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 DSC2Q02487 901 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 SULT2A1Q06520 285 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 MPP2Q14168 576 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 ADGRD1Q6QNK2 874 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 UNC5BQ8IZJ1 945 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 POLR1EQ9GZS1 481 aaKnown RBP18.69■□□□□ 0.58
SMPD1-208ENST00000533123 PPCSQ9HAB8 311 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 SLC25A13Q9UJS0 675 aa18.69■□□□□ 0.58
SMPD1-208ENST00000533123 A0A1W2PPM1 405 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 TBC1D3BA6NDS4 549 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 FAM155BO75949 473 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 SRCP12931 536 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 SEC24CP53992 1094 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 CORO7P57737 925 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 NIPAL4Q0D2K0 466 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 TERB1Q8NA31 727 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 GSDMBQ8TAX9 411 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 MGARPQ8TDB4 240 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 FCRL5Q96RD9 977 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 SEMA3CQ99985 751 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 MGME1Q9BQP7 344 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 TM6SF2Q9BZW4 377 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 KCNK9Q9NPC2 374 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 PPANQ9NQ55 473 aaKnown RBP18.68■□□□□ 0.58
SMPD1-208ENST00000533123 HEBP1Q9NRV9 189 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 HS3ST2Q9Y278 367 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 LOC730098B7Z3J9 87 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 RASA2Q15283 850 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 SMAD1Q15797 465 aaKnown RBP18.68■□□□□ 0.58
SMPD1-208ENST00000533123 CTAGE3PQ8IX95 158 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 PPM1NQ8N819 430 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 ARRDC2Q8TBH0 407 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 WFIKKN2Q8TEU8 576 aa18.68■□□□□ 0.58
SMPD1-208ENST00000533123 ATXN2LQ8WWM7 1075 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms