RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 ITGB7P26010 798 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 CTSKP43235 329 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 PEX5P50542 639 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 CCNHP51946 323 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 TAS2R38P59533 333 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 COPS2P61201 443 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 SNRPD1P62314 119 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 KIF19Q2TAC6 998 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 HLA-BQ31612 363 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 ARSIQ5FYB1 569 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 SEL1L2Q5TEA6 688 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 MEI1Q5TIA1 1274 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 NCBP2-AS2Q69YL0 99 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 PSAPL1Q6NUJ1 521 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 ERN2Q76MJ5 926 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 PRPF39Q86UA1 669 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 ZSCAN30Q86W11 494 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 SLC35F6Q8N357 371 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 ATPAF2Q8N5M1 289 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 PQLC3Q8N755 202 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 OR2AP1Q8NGE2 309 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 UBE2Q2Q8WVN8 375 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 ARRDC3Q96B67 414 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 FAF2Q96CS3 445 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 HES6Q96HZ4 224 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 TNKS2Q9H2K2 1166 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 GAREM1Q9H706 876 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 LRRC19Q9H756 370 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 DYRK4Q9NR20 520 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 ANKRD6Q9Y2G4 727 aa13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 FCF1Q9Y324 198 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-212ENST00000533058 hCG_1818297A0A087WSY0 165 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 A0A1W2PR77 199 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 KCNK3O14649 394 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 CST8O60676 142 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 NEBLO76041 1014 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 POP4O95707 220 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 PYGMP11217 842 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 CD38P28907 300 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 PMLP29590 882 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 GNG11P61952 73 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 SHC2P98077 582 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 OVGP1Q12889 678 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 PAFAH1B3Q15102 231 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 PPP2R5EQ16537 467 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 ZNF423Q2M1K9 1284 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 SLC45A4Q5BKX6 768 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 AFMIDQ63HM1 303 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 NAPEPLDQ6IQ20 393 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 IQCHQ86VS3 1027 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 ARHGAP12Q8IWW6 846 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 C17orf53Q8N3J3 647 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 CCNYQ8ND76 341 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 OR2I1PQ8NGU4 316 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 NSMCE1Q8WV22 266 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 VOPP1Q96AW1 172 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 HAUS1Q96CS2 278 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 OSBPL1AQ9BXW6 950 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 OSBPL8Q9BZF1 889 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 KLC2Q9H0B6 622 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 TM7SF3Q9NS93 570 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 UBA2Q9UBT2 640 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 IPO11Q9UI26 975 aaKnown RBP13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 SNX11Q9Y5W9 270 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 KNL1Q8NG31 2342 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 PCNX2A6NKB5 2137 aa13.12□□□□□ -0.31
TRAPPC4-212ENST00000533058 PLK4O00444 970 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 ENC1O14682 589 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 AP1G1O43747 822 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 PCDHGA12O60330 932 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 MAGEC1O60732 1142 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 MX2P20592 715 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 NEK3P51956 506 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 PPP2CBP62714 309 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 PPP2CAP67775 309 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 GBE1Q04446 702 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 SUZ12Q15022 739 aaKnown RBP13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 MYLK3Q32MK0 819 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 SETMARQ53H47 684 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 SLC9A4Q6AI14 798 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 AADACL2Q6P093 401 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 NPNTQ6UXI9 565 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 ARHGAP36Q6ZRI8 547 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 ADAT2Q7Z6V5 191 aaKnown RBP13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 HORMAD1Q86X24 394 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 TP53INP2Q8IXH6 220 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 PLD5Q8N7P1 536 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 MFSD2AQ8NA29 543 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 DEFB124Q8NES8 71 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 GRIN3AQ8TCU5 1115 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 P3H4Q92791 437 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 RAB7BQ96AH8 199 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 SERAC1Q96JX3 654 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 SLC6A18Q96N87 628 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 ERVMER34-1Q9H9K5 563 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 IL21RQ9HBE5 538 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 PDFQ9HBH1 243 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 FNDC3AQ9Y2H6 1198 aaKnown RBP13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 JRKLQ9Y4A0 524 aa13.11□□□□□ -0.31
TRAPPC4-212ENST00000533058 ACTL7AQ9Y615 435 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms