RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 SDE2Q6IQ49 451 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 GPR88Q9GZN0 384 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 LNPEPQ9UIQ6 1025 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 ARL5CA6NH57 179 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 RGS14O43566 566 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 PEX11AO75192 247 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 MLYCDO95822 493 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 PTPN3P26045 913 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 PIK3R1P27986 724 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 ATP6V0D1P61421 351 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 SEMA5AQ13591 1074 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 CRY1Q16526 586 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 OTUD3Q5T2D3 398 aaPredicted RBP15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 TRMT10BQ6PF06 316 aaKnown RBP15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 TPGS1Q6ZTW0 290 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 TAS1R3Q7RTX0 852 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 DHDDSQ86SQ9 333 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 MICU2Q8IYU8 434 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 CRYBG2Q8N1P7 616 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 OR4L1Q8NH43 312 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 FIG4Q92562 907 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 SERAC1Q96JX3 654 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 EIF2B3Q9NR50 452 aaKnown RBP15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 DPP7Q9UHL4 492 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 AGO1Q9UL18 857 aaKnown RBP15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 PTPRJQ12913 1337 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 CD3EAPO15446 510 aaKnown RBP15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 METTL18O95568 372 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 RHOQP17081 205 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 FOXN2P32314 431 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 SMAD3P84022 425 aaKnown RBP15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 DAB2P98082 770 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 SMARCB1Q12824 385 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 CSTF3Q12996 717 aaKnown RBP15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 NOGQ13253 232 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 GALNT3Q14435 633 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 RNF145Q96MT1 663 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 AGO3Q9H9G7 860 aaKnown RBP15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 GIMAP4Q9NUV9 329 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 ARL15Q9NXU5 204 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 PRPF19Q9UMS4 504 aaKnown RBP15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 ATP6AP2A0A1C7CYW4 349 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 C2orf71A6NGG8 1288 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 A8MX80 341 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 NT5C1B-RDH14C9J2C7 533 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 ATP6AP2O75787 350 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 DUSP4Q13115 394 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 TARBP2Q15633 366 aaKnown RBP15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 CCDC81Q6ZN84 652 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 USP45Q70EL2 814 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 RMND5BQ96G75 393 aaPredicted RBP15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 TEKT2Q9UIF3 430 aa15.43■□□□□ 0.06
PCDHA3-202ENST00000532566 CARNS1A5YM72 827 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 E9PAM4 449 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 CLOCKO15516 846 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 CCT8P50990 548 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 YBEYP58557 167 aaPredicted RBP15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 STARD3Q14849 445 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 SWT1Q5T5J6 900 aaKnown RBP15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 ERAP2Q6P179 960 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 MARK2Q7KZI7 788 aaKnown RBP15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 CLYBLQ8N0X4 340 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 MRPL17Q9NRX2 175 aaKnown RBP15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 GMIPQ9P107 970 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 IGSF9Q9P2J2 1179 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 FBXW11Q9UKB1 542 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 PCNAP12004 261 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 OLFML2BQ68BL8 750 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 GLIS1Q8NBF1 620 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 NMD3Q96D46 503 aaKnown RBP15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 TTPALQ9BTX7 342 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 TMCO1Q9UM00 188 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 COL2A1P02458 1487 aaPredicted RBP15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 TRIM38O00635 465 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 HNRNPCP07910 306 aaKnown RBP eCLIP15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 CES1P23141 567 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 OR1D2P34982 312 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 CCL23P55773 120 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 SLC25A11Q02978 314 aaKnown RBP15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 C1orf220Q5T0J3 134 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 AAGABQ6PD74 315 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 SYTL1Q8IYJ3 562 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 ZNF557Q8N988 423 aaPredicted RBP15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 SPATA22Q8NHS9 363 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 LPIN3Q9BQK8 851 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 C9orf16Q9BUW7 83 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 ZCCHC2Q9C0B9 1178 aaKnown RBP15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 SENP6Q9GZR1 1112 aaPredicted RBP15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 WDR55Q9H6Y2 383 aaPredicted RBP15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 SPAG4Q9NPE6 437 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 KLQ9UEF7 1012 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 SIX4Q9UIU6 781 aa15.42■□□□□ 0.06
PCDHA3-202ENST00000532566 NAV1Q8NEY1 1877 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 PRR23AA6NEV1 266 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 HGFP14210 728 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 MPSTP25325 297 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 FSTL1Q12841 308 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 KLF10Q13118 480 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 GRM3Q14832 879 aa15.41■□□□□ 0.06
PCDHA3-202ENST00000532566 C11orf96Q7Z7L8 435 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms