RNA–Protein interactions for RNA: ENST00000532354.1

CAVIN3-204, Transcript of caveolae associated protein 3, humanhuman

TSL 2

Gene CAVIN3, Length 1,025 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-204ENST00000532354 DHX35Q9H5Z1 703 aaKnown RBP16.7■□□□□ 0.26
CAVIN3-204ENST00000532354 PDFQ9HBH1 243 aa16.7■□□□□ 0.26
CAVIN3-204ENST00000532354 DONSONQ9NYP3 566 aa16.7■□□□□ 0.26
CAVIN3-204ENST00000532354 NLGN3Q9NZ94 848 aa16.7■□□□□ 0.26
CAVIN3-204ENST00000532354 DKK3Q9UBP4 350 aa16.7■□□□□ 0.26
CAVIN3-204ENST00000532354 PCSK1NQ9UHG2 260 aa16.7■□□□□ 0.26
CAVIN3-204ENST00000532354 IPO11Q9UI26 975 aaKnown RBP16.7■□□□□ 0.26
CAVIN3-204ENST00000532354 CELSR3Q9NYQ7 3312 aa16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 NEMP2A6NFY4 417 aa16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 EIF3CLB5ME19 914 aaKnown RBP16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 EEF2KO00418 725 aaKnown RBP16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 SCAMP1O15126 338 aa16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 PRAMEF11O60813 436 aa16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 NME1P15531 152 aaKnown RBP16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 PAPOLAP51003 745 aaKnown RBP16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 DAB2P98082 770 aa16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 E2F1Q01094 437 aa16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 INSM1Q01101 510 aaPredicted RBP16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 KLHL30Q0D2K2 578 aa16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 PDE1CQ14123 709 aaPredicted RBP16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 CYP4V2Q6ZWL3 525 aaPredicted RBP16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 PARGQ86W56 976 aa16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 HCAR2Q8TDS4 363 aa16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 FNIP1Q8TF40 1166 aa16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 CELF6Q96J87 481 aaKnown RBP16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 EXOC2Q96KP1 924 aa16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 KCTD15Q96SI1 283 aaPredicted RBP16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 EIF3CQ99613 913 aaKnown RBP16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 EDEM3Q9BZQ6 932 aa16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 UBA2Q9UBT2 640 aaPredicted RBP16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 CNOT8Q9UFF9 292 aaKnown RBP16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 KLF15Q9UIH9 416 aa16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 TDRD6O60522 2096 aaKnown RBP16.69■□□□□ 0.26
CAVIN3-204ENST00000532354 NEBLO76041 1014 aa16.68■□□□□ 0.26
CAVIN3-204ENST00000532354 TM7SF2O76062 418 aa16.68■□□□□ 0.26
CAVIN3-204ENST00000532354 RNF8O76064 485 aa16.68■□□□□ 0.26
CAVIN3-204ENST00000532354 PIGNO95427 931 aa16.68■□□□□ 0.26
CAVIN3-204ENST00000532354 ALPPL2P10696 532 aa16.68■□□□□ 0.26
CAVIN3-204ENST00000532354 CKMT1AP12532 417 aa16.68■□□□□ 0.26
CAVIN3-204ENST00000532354 SKILP12757 684 aa16.68■□□□□ 0.26
CAVIN3-204ENST00000532354 MIPP30301 263 aa16.68■□□□□ 0.26
CAVIN3-204ENST00000532354 TMEM52BQ4KMG9 183 aa16.68■□□□□ 0.26
CAVIN3-204ENST00000532354 RFX8Q6ZV50 586 aa16.68■□□□□ 0.26
CAVIN3-204ENST00000532354 FAM181AQ8N9Y4 354 aa16.68■□□□□ 0.26
CAVIN3-204ENST00000532354 HNRNPLLQ8WVV9 542 aaKnown RBP16.68■□□□□ 0.26
CAVIN3-204ENST00000532354 APOLD1Q96LR9 279 aa16.68■□□□□ 0.26
CAVIN3-204ENST00000532354 SUV39H2Q9H5I1 410 aa16.68■□□□□ 0.26
CAVIN3-204ENST00000532354 MBNL1Q9NR56 388 aaKnown RBP16.68■□□□□ 0.26
CAVIN3-204ENST00000532354 CSNK1G3Q9Y6M4 447 aa16.68■□□□□ 0.26
CAVIN3-204ENST00000532354 URB1O60287 2271 aaKnown RBP16.68■□□□□ 0.26
CAVIN3-204ENST00000532354 ITPR1Q14643 2758 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 ADAMTS20P59510 1910 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 LY6G6EA0A0G2JKS1 128 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 ARHGAP42A6NI28 874 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 K7ESM1 405 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 DAPK3O43293 454 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 PRPSAP2O60256 369 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 BUB1BO60566 1050 aaPredicted RBP16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 LRCH4O75427 683 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 MYF5P13349 255 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 ERCC2P18074 760 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 IGFALSP35858 605 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 SUOXP51687 545 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 EIF2B5Q13144 721 aaKnown RBP16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 GRM3Q14832 879 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 RTP5Q14D33 572 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 KLHL40Q2TBA0 621 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 COL28A1Q2UY09 1125 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 FIGNQ5HY92 759 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 AFMIDQ63HM1 303 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 VPS36Q86VN1 386 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 PSTKQ8IV42 348 aaKnown RBP16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 ARHGAP12Q8IWW6 846 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 ZNF548Q8NEK5 533 aaPredicted RBP16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 CXorf40AQ8TE69 158 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 ZNF653Q96CK0 615 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 NXPE2Q96DL1 559 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 NCAPGQ9BPX3 1015 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 WRAP53Q9BUR4 548 aaKnown RBP16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 DUSP23Q9BVJ7 150 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 NRSN2Q9GZP1 204 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 ISCUQ9H1K1 167 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 CLCA2Q9UQC9 943 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 U3KQA8 63 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 CACNA1GO43497 2377 aa16.67■□□□□ 0.26
CAVIN3-204ENST00000532354 TSPAN11A1L157 253 aa16.66■□□□□ 0.26
CAVIN3-204ENST00000532354 H3BM21 787 aa16.66■□□□□ 0.26
CAVIN3-204ENST00000532354 AQP9O43315 295 aa16.66■□□□□ 0.26
CAVIN3-204ENST00000532354 SERPINC1P01008 464 aa16.66■□□□□ 0.26
CAVIN3-204ENST00000532354 JUNDP17535 347 aa16.66■□□□□ 0.26
CAVIN3-204ENST00000532354 PTMSP20962 102 aa16.66■□□□□ 0.26
CAVIN3-204ENST00000532354 CSNK1DP48730 415 aa16.66■□□□□ 0.26
CAVIN3-204ENST00000532354 HCAR3P49019 387 aa16.66■□□□□ 0.26
CAVIN3-204ENST00000532354 YPEL5P62699 121 aa16.66■□□□□ 0.26
CAVIN3-204ENST00000532354 UGP2Q16851 508 aa16.66■□□□□ 0.26
CAVIN3-204ENST00000532354 PPP6R3Q5H9R7 873 aaPredicted RBP16.66■□□□□ 0.26
CAVIN3-204ENST00000532354 DCBLD1Q8N8Z6 715 aa16.66■□□□□ 0.26
CAVIN3-204ENST00000532354 TP53I13Q8NBR0 393 aaPredicted RBP16.66■□□□□ 0.26
CAVIN3-204ENST00000532354 TSEN2Q8NCE0 465 aaKnown RBP16.66■□□□□ 0.26
CAVIN3-204ENST00000532354 ZNF641Q96N77 438 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms