RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 SLC8A3P57103 927 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 ABHD18Q0P651 414 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 ABRQ12979 859 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 MTX1Q13505 466 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 CUL1Q13616 776 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 TSTA3Q13630 321 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 MST1LQ2TV78 715 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 JADE1Q6IE81 842 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 CAPRIN2Q6IMN6 1127 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 C6orf89Q6UWU4 347 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 TRABD2AQ86V40 505 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 ZNF573Q86YE8 665 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 PQLC1Q8N2U9 271 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 EXOC6Q8TAG9 804 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 ACTRT2Q8TDY3 377 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 HIST1H2AHQ96KK5 128 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 HIST1H2AJQ99878 128 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 NSRP1Q9H0G5 558 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 AGPAT5Q9NUQ2 364 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 TMEM140Q9NV12 185 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 RSPH14Q9UHP6 348 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 TRMT6Q9UJA5 497 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 DRG1Q9Y295 367 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 ZBED9Q6R2W3 1325 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 NPHP3Q7Z494 1330 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 SMG6Q86US8 1419 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 CFAP43Q8NDM7 1665 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 LOC100509620A0A075B734 347 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 ACOT7O00154 380 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 HGSO14964 777 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 CLDN3O15551 220 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 AVILO75366 819 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 RHBDL1O75783 438 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 CIB2O75838 187 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 ACP5P13686 325 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 AREGP15514 252 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 CTNNA2P26232 953 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 CD68P34810 354 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 NUP62P37198 522 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 CLCN4P51793 760 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 PNLIPRP2P54317 469 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 CTXN1P60606 82 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 PPIGQ13427 754 aaKnown RBP eCLIP5.32□□□□□ -1.568e-6■■■■□ 22.7
ECHDC1-222ENST00000531967 VEPH1Q14D04 833 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 RAB3GAP1Q15042 981 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 MANEALQ5VSG8 457 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 SFMBT2Q5VUG0 894 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 RAET1GQ6H3X3 334 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 TOM1L2Q6ZVM7 507 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 KCTD20Q7Z5Y7 419 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 WFDC3Q8IUB2 231 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 REXO1L1PQ8IX06 675 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 CADM4Q8NFZ8 388 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 TNFRSF25Q93038 417 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 EFHD2Q96C19 240 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 DPYSL5Q9BPU6 564 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 P2RY12Q9H244 342 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 SYNDIG1Q9H7V2 258 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 SYNPO2LQ9H987 977 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 BTBD7Q9P203 1132 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 ADAMTS6Q9UKP5 1117 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 PLEKHA6Q9Y2H5 1048 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 RAD54BQ9Y620 910 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 TRAV6A0A075B6T7 132 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 SENP3-EIF4A1A0A087X0R7 540 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 C5orf51A6NDU8 294 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 HSBP1L1C9JCN9 74 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 MEIS2O14770 477 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 SLC30A4O14863 429 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 SURF6O75683 361 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 LMNAP02545 664 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 GNAI3P08754 354 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 CHN1P15882 459 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 ZNF24P17028 368 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 ITIH1P19827 911 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 PTPN6P29350 595 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 GABRB2P47870 512 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 NAGLUP54802 743 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 UCP2P55851 309 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 GNAI1P63096 354 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 NUCB2P80303 420 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 MTM1Q13496 603 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 NFKBIBQ15653 356 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 DPCR1Q3MIW9 517 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 CYP27C1Q4G0S4 372 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 ARHGAP40Q5TG30 622 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 PRAMEF20Q5VT98 475 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 ABHD15Q6UXT9 468 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 TMCO2Q7Z6W1 182 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 PLD5Q8N7P1 536 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 PTGR2Q8N8N7 351 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 ENDOVQ8N8Q3 282 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 KCNH5Q8NCM2 988 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 CCNYQ8ND76 341 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 SLC2A12Q8TD20 617 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 SNX33Q8WV41 574 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 CCT7Q99832 543 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 CDK19Q9BWU1 502 aa5.31□□□□□ -1.56
ECHDC1-222ENST00000531967 GPR88Q9GZN0 384 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms