RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 TEX11Q8IYF3 940 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 TTC30BQ8N4P2 665 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 LINC01465Q8N7H1 131 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 EXD3Q8N9H8 876 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 CADM4Q8NFZ8 388 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 FAM110DQ8TAY7 271 aaPredicted RBP4.64□□□□□ -1.67
USP47-211ENST00000531513 NSMCE1Q8WV22 266 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 ZNF845Q96IR2 970 aaPredicted RBP4.64□□□□□ -1.67
USP47-211ENST00000531513 VCPIP1Q96JH7 1222 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 WDFY2Q96P53 400 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 FYTTD1Q96QD9 318 aaKnown RBP4.64□□□□□ -1.67
USP47-211ENST00000531513 STRA6Q9BX79 667 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 HEMGNQ9BXL5 484 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 SIL1Q9H173 461 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 SH2D4AQ9H788 454 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 POLR1BQ9H9Y6 1135 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 SCPEP1Q9HB40 452 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 CCDC177Q9NQR7 707 aaPredicted RBP4.64□□□□□ -1.67
USP47-211ENST00000531513 C20orf141Q9NUB4 165 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 SPATS2LQ9NUQ6 558 aaKnown RBP4.64□□□□□ -1.67
USP47-211ENST00000531513 TMEM248Q9NWD8 314 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 ASIC5Q9NY37 505 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 ZNF112Q9UJU3 913 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 INTS6Q9UL03 887 aaKnown RBP4.64□□□□□ -1.67
USP47-211ENST00000531513 DTX4Q9Y2E6 619 aa4.64□□□□□ -1.67
USP47-211ENST00000531513 EIF3CLB5ME19 914 aaKnown RBP4.63□□□□□ -1.67
USP47-211ENST00000531513 UBE2Q2LH0YL09 131 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 LIASO43766 372 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 STRNO43815 780 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 ENTPD3O75355 529 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 CNTN5O94779 1100 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 SEC31AO94979 1220 aaKnown RBP4.63□□□□□ -1.67
USP47-211ENST00000531513 CSPG5O95196 566 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 HSPA4LO95757 839 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 RFPL3SP0C7P2 107 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 APEHP13798 732 aaKnown RBP4.63□□□□□ -1.67
USP47-211ENST00000531513 PRF1P14222 555 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 SCP2P22307 547 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 MCM3P25205 808 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 ZNF84P51523 738 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 PSMC6P62333 389 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 GARNL3Q5VVW2 1013 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 ATG9BQ674R7 924 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 KIAA1161Q6NSJ0 714 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 ARHGAP12Q8IWW6 846 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.63□□□□□ -1.67
USP47-211ENST00000531513 ATP6V1E2Q96A05 226 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 MARK4Q96L34 752 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 ABHD14AQ9BUJ0 271 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 CADM1Q9BY67 442 aaKnown RBP4.63□□□□□ -1.67
USP47-211ENST00000531513 BABAM1Q9NWV8 329 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 NCKIPSDQ9NZQ3 722 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 UPB1Q9UBR1 384 aa4.63□□□□□ -1.67
USP47-211ENST00000531513 FNDC1Q4ZHG4 1894 aaPredicted RBP4.62□□□□□ -1.67
USP47-211ENST00000531513 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.62□□□□□ -1.67
USP47-211ENST00000531513 A0A1W2PQF6 199 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 OR6C68A6NDL8 312 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 FAM90A10PA6NDY2 464 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 LRRC53A6NM62 1247 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 A8MZ25 164 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 CLIC1O00299 241 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 ADAM20O43506 726 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 PAGE4O60829 102 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 ENO1P06733 434 aaKnown RBP4.62□□□□□ -1.67
USP47-211ENST00000531513 TGM2P21980 687 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 TBXAS1P24557 533 aaPredicted RBP4.62□□□□□ -1.67
USP47-211ENST00000531513 TYK2P29597 1187 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 PTPN9P43378 593 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 VPS41P49754 854 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 HSD17B4P51659 736 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 NIPAL4Q0D2K0 466 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 AIMP1Q12904 312 aaKnown RBP4.62□□□□□ -1.67
USP47-211ENST00000531513 NTRK2Q16620 822 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 GLE1Q53GS7 698 aaKnown RBP4.62□□□□□ -1.67
USP47-211ENST00000531513 MEX3CQ5U5Q3 659 aaKnown RBP4.62□□□□□ -1.67
USP47-211ENST00000531513 SLC30A9Q6PML9 568 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 ZNF813Q6ZN06 617 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 RTL10Q7L3V2 364 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 PRSS45Q7RTY3 260 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 MDGA2Q7Z553 956 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 TICAM1Q8IUC6 712 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 GHDCQ8N2G8 530 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 SCAIQ8N9R8 606 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 ZNF398Q8TD17 642 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 PGAM5Q96HS1 289 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 SPATA17Q96L03 361 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 MMS19Q96T76 1030 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 ADPGKQ9BRR6 497 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 EFHD1Q9BUP0 239 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 TEX12Q9BXU0 123 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 TRIM2Q9C040 744 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 RABEP2Q9H5N1 569 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 FBRSL1Q9HCM7 1045 aaKnown RBP4.62□□□□□ -1.67
USP47-211ENST00000531513 SNTG1Q9NSN8 517 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 ASNSD1Q9NWL6 643 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 ARL15Q9NXU5 204 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 MRPL15Q9P015 296 aaKnown RBP4.62□□□□□ -1.67
USP47-211ENST00000531513 KIAA1456Q9P272 454 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 MKLN1Q9UL63 735 aa4.62□□□□□ -1.67
USP47-211ENST00000531513 A4GNTQ9UNA3 340 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms