RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 CTPS1P17812 591 aa4.44□□□□□ -1.7
PTPRK-220ENST00000531466 MCM3P25205 808 aa4.44□□□□□ -1.7
PTPRK-220ENST00000531466 DCTN1Q14203 1278 aa4.44□□□□□ -1.7
PTPRK-220ENST00000531466 AP5B1Q2VPB7 878 aa4.44□□□□□ -1.7
PTPRK-220ENST00000531466 TMEM30BQ3MIR4 351 aa4.44□□□□□ -1.7
PTPRK-220ENST00000531466 ARHGAP11AQ6P4F7 1023 aa4.44□□□□□ -1.7
PTPRK-220ENST00000531466 DENND6AQ8IWF6 608 aa4.44□□□□□ -1.7
PTPRK-220ENST00000531466 DMBX1Q8NFW5 382 aa4.44□□□□□ -1.7
PTPRK-220ENST00000531466 CREB3L4Q8TEY5 395 aa4.44□□□□□ -1.7
PTPRK-220ENST00000531466 TMEM19Q96HH6 336 aa4.44□□□□□ -1.7
PTPRK-220ENST00000531466 TTC14Q96N46 770 aa4.44□□□□□ -1.7
PTPRK-220ENST00000531466 MMTAG2Q9BU76 263 aaKnown RBP4.44□□□□□ -1.7
PTPRK-220ENST00000531466 MOV10L1Q9BXT6 1211 aaKnown RBP4.44□□□□□ -1.7
PTPRK-220ENST00000531466 FBXO40Q9UH90 709 aa4.44□□□□□ -1.7
PTPRK-220ENST00000531466 CGNL1Q0VF96 1302 aa4.44□□□□□ -1.7
PTPRK-220ENST00000531466 HSPA12AO43301 675 aa4.43□□□□□ -1.7
PTPRK-220ENST00000531466 ZNF500O60304 480 aaPredicted RBP4.43□□□□□ -1.7
PTPRK-220ENST00000531466 ACP5P13686 325 aa4.43□□□□□ -1.7
PTPRK-220ENST00000531466 CHN1P15882 459 aa4.43□□□□□ -1.7
PTPRK-220ENST00000531466 PTPN9P43378 593 aa4.43□□□□□ -1.7
PTPRK-220ENST00000531466 SREBF2Q12772 1141 aa4.43□□□□□ -1.7
PTPRK-220ENST00000531466 ME3Q16798 604 aa4.43□□□□□ -1.7
PTPRK-220ENST00000531466 ZNF497Q6ZNH5 498 aa4.43□□□□□ -1.7
PTPRK-220ENST00000531466 RAB11FIP2Q7L804 512 aa4.43□□□□□ -1.7
PTPRK-220ENST00000531466 DSG4Q86SJ6 1040 aa4.43□□□□□ -1.7
PTPRK-220ENST00000531466 ZC3HC1Q86WB0 502 aaKnown RBP4.43□□□□□ -1.7
PTPRK-220ENST00000531466 ANKRD13AQ8IZ07 590 aa4.43□□□□□ -1.7
PTPRK-220ENST00000531466 PARD3BQ8TEW8 1205 aa4.43□□□□□ -1.7
PTPRK-220ENST00000531466 CPT1BQ92523 772 aa4.43□□□□□ -1.7
PTPRK-220ENST00000531466 ABCF3Q9NUQ8 709 aa4.43□□□□□ -1.7
PTPRK-220ENST00000531466 THAP1Q9NVV9 213 aa4.43□□□□□ -1.7
PTPRK-220ENST00000531466 AZU1P20160 251 aa4.42□□□□□ -1.7
PTPRK-220ENST00000531466 ABCB4P21439 1286 aa4.42□□□□□ -1.7
PTPRK-220ENST00000531466 SERPINA4P29622 427 aa4.42□□□□□ -1.7
PTPRK-220ENST00000531466 HSD17B4P51659 736 aa4.42□□□□□ -1.7
PTPRK-220ENST00000531466 ECT2LQ008S8 904 aa4.42□□□□□ -1.7
PTPRK-220ENST00000531466 OASLQ15646 514 aaKnown RBP4.42□□□□□ -1.7
PTPRK-220ENST00000531466 TTC22Q5TAA0 569 aa4.42□□□□□ -1.7
PTPRK-220ENST00000531466 DGAT2L7PQ6IED9 249 aa4.42□□□□□ -1.7
PTPRK-220ENST00000531466 SHFQ7M4L6 423 aa4.42□□□□□ -1.7
PTPRK-220ENST00000531466 SYTL1Q8IYJ3 562 aa4.42□□□□□ -1.7
PTPRK-220ENST00000531466 PTGR2Q8N8N7 351 aaPredicted RBP4.42□□□□□ -1.7
PTPRK-220ENST00000531466 SPATA22Q8NHS9 363 aa4.42□□□□□ -1.7
PTPRK-220ENST00000531466 FAM76AQ8TAV0 307 aa4.42□□□□□ -1.7
PTPRK-220ENST00000531466 FAM71BQ8TC56 605 aa4.42□□□□□ -1.7
PTPRK-220ENST00000531466 RNF183Q96D59 192 aa4.42□□□□□ -1.7
PTPRK-220ENST00000531466 CCDC138Q96M89 665 aa4.42□□□□□ -1.7
PTPRK-220ENST00000531466 YME1L1Q96TA2 773 aa4.42□□□□□ -1.7
PTPRK-220ENST00000531466 CHMP4AQ9BY43 222 aa4.42□□□□□ -1.7
PTPRK-220ENST00000531466 C19orf53Q9UNZ5 99 aaPredicted RBP4.42□□□□□ -1.7
PTPRK-220ENST00000531466 PSAT1Q9Y617 370 aa4.42□□□□□ -1.7
PTPRK-220ENST00000531466 MID1O15344 667 aa4.41□□□□□ -1.7
PTPRK-220ENST00000531466 TIPRLO75663 272 aa4.41□□□□□ -1.7
PTPRK-220ENST00000531466 PIGAP37287 484 aa4.41□□□□□ -1.7
PTPRK-220ENST00000531466 MTNR1AP48039 350 aa4.41□□□□□ -1.7
PTPRK-220ENST00000531466 SLC18A2Q05940 514 aa4.41□□□□□ -1.7
PTPRK-220ENST00000531466 PDCLQ13371 301 aa4.41□□□□□ -1.7
PTPRK-220ENST00000531466 SPARCL1Q14515 664 aa4.41□□□□□ -1.7
PTPRK-220ENST00000531466 IL13RA2Q14627 380 aa4.41□□□□□ -1.7
PTPRK-220ENST00000531466 RUNDC3AQ59EK9 446 aa4.41□□□□□ -1.7
PTPRK-220ENST00000531466 CCAR1Q8IX12 1150 aaKnown RBP4.41□□□□□ -1.7
PTPRK-220ENST00000531466 KCNH5Q8NCM2 988 aa4.41□□□□□ -1.7
PTPRK-220ENST00000531466 SCAMP5Q8TAC9 235 aa4.41□□□□□ -1.7
PTPRK-220ENST00000531466 OTUD7AQ8TE49 926 aaPredicted RBP4.41□□□□□ -1.7
PTPRK-220ENST00000531466 C3orf49Q96BT1 292 aa4.41□□□□□ -1.7
PTPRK-220ENST00000531466 LITAFQ99732 161 aa4.41□□□□□ -1.7
PTPRK-220ENST00000531466 ZIC3O60481 467 aa4.4□□□□□ -1.71
PTPRK-220ENST00000531466 ACTL6BO94805 426 aa4.4□□□□□ -1.71
PTPRK-220ENST00000531466 PRSS1P07477 247 aa4.4□□□□□ -1.71
PTPRK-220ENST00000531466 TFPIP10646 304 aa4.4□□□□□ -1.71
PTPRK-220ENST00000531466 BYSLQ13895 437 aaKnown RBP4.4□□□□□ -1.71
PTPRK-220ENST00000531466 RPE65Q16518 533 aa4.4□□□□□ -1.71
PTPRK-220ENST00000531466 PAPPA-AS1Q5QFB9 102 aa4.4□□□□□ -1.71
PTPRK-220ENST00000531466 NAPEPLDQ6IQ20 393 aa4.4□□□□□ -1.71
PTPRK-220ENST00000531466 RASGRP2Q7LDG7 609 aa4.4□□□□□ -1.71
PTPRK-220ENST00000531466 SLC44A2Q8IWA5 706 aaPredicted RBP4.4□□□□□ -1.71
PTPRK-220ENST00000531466 F2RL3Q96RI0 385 aa4.4□□□□□ -1.71
PTPRK-220ENST00000531466 ATP8A2Q9NTI2 1148 aa4.4□□□□□ -1.71
PTPRK-220ENST00000531466 NDUFAF4Q9P032 175 aa4.4□□□□□ -1.71
PTPRK-220ENST00000531466 KCND3Q9UK17 655 aa4.4□□□□□ -1.71
PTPRK-220ENST00000531466 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.39□□□□□ -1.71
PTPRK-220ENST00000531466 CAPN9O14815 690 aa4.39□□□□□ -1.71
PTPRK-220ENST00000531466 SRCP12931 536 aa4.39□□□□□ -1.71
PTPRK-220ENST00000531466 TRIM27P14373 513 aa4.39□□□□□ -1.71
PTPRK-220ENST00000531466 FMO5P49326 533 aa4.39□□□□□ -1.71
PTPRK-220ENST00000531466 MVDP53602 400 aa4.39□□□□□ -1.71
PTPRK-220ENST00000531466 CHAF1AQ13111 956 aaPredicted RBP4.39□□□□□ -1.71
PTPRK-220ENST00000531466 AMZ1Q400G9 498 aa4.39□□□□□ -1.71
PTPRK-220ENST00000531466 ATP13A5Q4VNC0 1218 aa4.39□□□□□ -1.71
PTPRK-220ENST00000531466 IRAK1BP1Q5VVH5 260 aa4.39□□□□□ -1.71
PTPRK-220ENST00000531466 FMNL3Q8IVF7 1028 aa4.39□□□□□ -1.71
PTPRK-220ENST00000531466 SFTPA2Q8IWL1 248 aa4.39□□□□□ -1.71
PTPRK-220ENST00000531466 MAPK1IP1LQ8NDC0 245 aa4.39□□□□□ -1.71
PTPRK-220ENST00000531466 ALG14Q96F25 216 aa4.39□□□□□ -1.71
PTPRK-220ENST00000531466 KATNAL1Q9BW62 490 aa4.39□□□□□ -1.71
PTPRK-220ENST00000531466 OBP2BQ9NPH6 170 aa4.39□□□□□ -1.71
PTPRK-220ENST00000531466 ANKRD10Q9NXR5 420 aa4.39□□□□□ -1.71
PTPRK-220ENST00000531466 FNIP2Q9P278 1114 aa4.39□□□□□ -1.71
PTPRK-220ENST00000531466 A0A1W2PS18 150 aa4.38□□□□□ -1.71
PTPRK-220ENST00000531466 PPM1GO15355 546 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms